Desulfofustis limnaeus: DPPLL_21520
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Entry
DPPLL_21520 CDS
T09067
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dlm
Desulfofustis limnaeus
Brite
KEGG Orthology (KO) [BR:
dlm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dlm03016
]
DPPLL_21520 (truB)
Enzymes [BR:
dlm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DPPLL_21520 (truB)
Transfer RNA biogenesis [BR:
dlm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DPPLL_21520 (truB)
Prokaryotic type
DPPLL_21520 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
BDD87787
LinkDB
All DBs
Position
complement(2340658..2341434)
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AA seq
258 aa
AA seq
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MQMADGTGVMLVDKPAGFTSFAMVRVLRRLSRVKKVGHAGTLDPFATGLLVICIGRPATR
LIGAMMEGKKHYLATVQLGCVSTTHDPEGELHATGPWPAISAETMEAVLARFRGTIMQTP
PAFSALKHQGKPLYHYARQGIVVEKPPRPVVIDELEWLDARSQVEVTDPTVQLRIRCGKG
TYIRSLAADIGAALGCGAFLSGLRRLGSGCFSVEEAVTGAALAGPDGRALLAEGLLDVEQ
VRKRLQYSSEIYNMPDYA
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
gtgcagatggctgacggaacgggggtgatgctggttgacaagccggctggcttcacctcg
ttcgccatggttcgtgtgctgcgccgtttatccagggtgaaaaaagtcggtcatgccggc
acgctcgatccgtttgccaccggtttgctggtcatctgtatcggtcgtccggccacccgg
ttgatcggcgcgatgatggagggtaaaaagcactatttggccacggtgcagttgggatgt
gtctcaacgacccatgacccggaaggggagctgcatgccaccgggccgtggccggccatc
tcggcagagacgatggaagcggtgctggcccggtttcgcggcaccatcatgcagacgccg
ccggccttttcggccttgaaacaccagggcaagccgttgtatcactacgcccggcagggt
attgtggtggaaaagccgccgcggccggtggtgatcgacgagttggaatggctcgatgcc
cgctcgcaggttgaggtgaccgacccgacggtgcagctgcggatccgttgcggcaagggc
acctacatccgttcgcttgccgcagacatcggtgctgccctcggttgcggcgcctttctg
agcgggttgcggcgcctcggtagcggctgtttctccgtcgaggaggcggtgaccggagcg
gcgctggctggtcccgacggccgggccctactcgccgaggggctgcttgatgtggaacag
gtacggaaacgcttgcaatattcaagcgaaatttataatatgcctgattacgcttga
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