KEGG   Desulfofustis limnaeus: DPPLL_29210
Entry
DPPLL_29210       CDS       T09067                                 
Name
(GenBank) type I-C CRISPR-associated protein Cas8c/Csd1
  KO
K19117  CRISPR-associated protein Csd1
Organism
dlm  Desulfofustis limnaeus
Brite
KEGG Orthology (KO) [BR:dlm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dlm02048]
    DPPLL_29210
Prokaryotic defense system [BR:dlm02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    DPPLL_29210
SSDB
Motif
Pfam: Cas_Csd1 DUF5802
Other DBs
NCBI-ProteinID: BDD88556
UniProt: A0ABM7WCB5
LinkDB
Position
complement(3221429..3223183)
AA seq 584 aa
MILQALTAYYKRLAAEGTAVSEGFKRIEIPFLIILNMEGEFVGLQDTRVPHGRKLVAQSF
LIPTENERQGSKAWQKTNFLWDHYGYVLGWPKTENKKDKEMARKQHETFVAETKMISTFC
TEDKAVEAVCRFVVSGNFDAVFNHRLWKDCSKISGCNLTFQIENQIGLVCQRDSIKAFIS
KGQFVNDEDEQSDCIREWVGFCLVTGETGPIARLHPRTPVVGSKSGAKIVSFQKNMGFDS
YGKIQSYNAPTCKKAAFAYTTALNEMLSKKSRQKIFVGDATTVFWAAKKNDLEDVFADIF
GEPAKENPEQANKAIRILYEAPKAGVPPLTEDYTRFFVLGLAPNAARIAVRFWHVGTVGE
TAQHILQHFEDCKVVHGPKQPEYLSLFRLLVSTALQGKSENIPANLAGEFMKAILAGTPY
PHTLLAAVIRRCRAEREVTYPRAALLKAVLARAARFYKHSEQEVGMALDTGNSNIGYRLG
RLFATLEKIQEEANPGINATIRDRFYGAASGTPVAAFPHLMKLKNHHLAKLGNRGRAVNL
EKVITEIMDAIVDFPTHLSLQDQGRFAVGYYHQRQVFFTKNTNN
NT seq 1755 nt   +upstreamnt  +downstreamnt
atgattttgcaagcgttaaccgcatattataagcgactagccgcagaaggaaccgcagtg
tccgaggggttcaaacgcattgagattccgtttctcatcatcctcaatatggaaggggag
tttgtcggtctacaagatactcgtgtcccgcatggtagaaaacttgtggcccaatcattt
cttattccaacagaaaacgagcgtcaaggaagcaaggcctggcaaaaaactaatttcttg
tgggaccactatggctatgttttgggctggccaaaaacagagaataaaaaagataaagaa
atggccagaaaacaacatgaaactttcgttgcagaaacaaagatgatttcgaccttttgc
actgaagataaagcggttgaggccgtttgcagattcgttgtctcggggaattttgatgct
gtattcaatcatcggctttggaaggattgttccaaaatttcaggttgcaatcttaccttc
cagattgaaaatcaaataggacttgtttgtcagcgtgatagcattaaggcctttatttca
aaagggcagttcgtcaatgatgaagatgaacagtctgattgcattcgagagtgggtaggg
ttttgccttgtcactggggaaactggtccgattgctcggttacatccacgcacacctgtt
gttggttcgaaaagcggtgcgaagatcgtctcgttccagaaaaatatggggttcgattcg
tatggcaaaatacaaagctacaacgcaccgacttgcaagaaagcggcttttgcgtacaca
acggcattaaatgagatgctctccaaaaaatctcgacaaaaaatatttgtcggtgacgcc
acaactgttttttgggctgcaaagaaaaatgatctggaagatgtctttgccgatatcttt
ggcgaaccggcaaaggagaaccccgagcaagccaataaagccatccgcattctctatgaa
gctcctaaggcgggagtgccgccgctaactgaagattatacgcggttcttcgttctgggg
ctcgctcctaacgcagcccgcattgctgtgcgtttctggcacgtgggtacagtgggagag
acggcccagcacatcctgcagcatttcgaggattgcaaagtggtgcatgggccgaaacag
cccgagtatctttctctcttccgcctgcttgtatccaccgccctgcagggaaagtcggaa
aacattccagccaatcttgccggtgagttcatgaaggcaatccttgccggaactccctat
ccgcacactctacttgcagccgtgattcgtcgttgtcgggcggaacgtgaagtaacatat
cctcgcgccgccctccttaaagcggttctggctcgggcagcacgattttataaacattca
gaacaggaggtaggcatggccttggatactggcaacagcaatatcggctatcggctcggg
cgactttttgccacgttggaaaaaatacaagaagaagcaaacccaggcatcaacgccacc
atccgtgaccgtttctacggagcggcttccggcaccccggtggccgccttcccgcatctt
atgaagttgaaaaaccatcatcttgccaagttgggtaatcgaggacgggccgtaaatctg
gaaaaggtgatcactgaaatcatggacgccattgtcgatttcccgacccacctctctctt
caggatcagggtcgttttgcggtaggctactaccaccaacgacaggtctttttcacgaaa
aacacaaataattga

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