KEGG   Desulfofustis limnaeus: DPPLL_33560
Entry
DPPLL_33560       CDS       T09067                                 
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
dlm  Desulfofustis limnaeus
Pathway
dlm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dlm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DPPLL_33560 (rhlB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dlm03019]
    DPPLL_33560 (rhlB)
Enzymes [BR:dlm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     DPPLL_33560 (rhlB)
Messenger RNA biogenesis [BR:dlm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     DPPLL_33560 (rhlB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 AAA_22 Str_synth
Other DBs
NCBI-ProteinID: BDD88991
UniProt: A0ABM7WDF9
LinkDB
Position
complement(3695787..3697055)
AA seq 422 aa
MDPLPGKTRFHDFSIDRRVMQGIADQEFRYCTPIQEQGLPIVLNGRDLIGRAQTGTGKTA
VFLIGIFCRLLQDQERPPPGHPRALIIAPTRELVLQIVKDGRTLGAHTPLKMVAVYGGSD
VKTQGEALRQQRFDVVAATPGRLLDYLRRGVLALDRCTTLVLDEADRMLDMGFLPDVRRI
LAHLPGSEKRQTLLFSATISDDVRRLADRWCHRPVYQEAGEQSVSVEKIEQRVYLTTSEE
KFTLLYNLIKGRDHGRILIFENMKSDAAALAARLRTYGIDNLLLTGDVPQTKRLSRLEAF
RAGGDRIMVATDVAGRGIHVDDIVYVVNYTLPDEPENYVHRIGRTGRAGAAGVAVSFACE
RGAFAIPDIEAFIGRPLPCTEPEVDMLAPLPEPSMAEKKGSRRSNRPRSGRKNRQSRPGS
SR
NT seq 1269 nt   +upstreamnt  +downstreamnt
gtggatccgttacccggcaagacccgattccacgatttctccattgaccggcgggttatg
cagggcattgccgatcaggaatttcgctattgtacgccaatccaggagcagggcttgccg
atcgttctgaacgggcgggacctgatcggccgagcccagaccggaaccggcaagacggcg
gtctttctcatcggtattttctgtcgtctgttgcaggaccaggagcggccgcctcccggt
catccccgggcgttgatcattgccccgacccgggaactggttctgcagatcgtcaaggac
ggccggactctcggcgctcacacgccgctgaagatggtggccgtctatggtggctccgat
gtgaagacccagggtgaggcgttgcggcagcagcgcttcgatgtggtcgccgcaacgccg
ggccggttactcgattacctgcgtcgtggcgttctggcgctcgatcgttgcacgacgctg
gttctggatgaggcggatcgcatgctcgacatgggctttttgccggatgtccggcggatt
ctggcccatctgccgggatcagagaagcggcagaccctgctcttctcggcgaccatctcc
gacgatgtccgacgtcttgcggatcgctggtgtcaccggccggtctaccaggaggctggt
gaacagagtgtctcggtggagaagatcgaacagcgggtatacctgaccacctccgaggaa
aaattcaccctgctctacaatctcatcaagggacgagaccacggacggatcctcatcttc
gaaaacatgaagagtgacgccgccgccctggcggcccggttgcggacttacggcatcgac
aacctgctgctgaccggtgatgtgccgcagaccaagcggctgtcgcgactcgaggcgttt
cgcgccggtggggatcggatcatggtggcaaccgatgtggcgggccggggcatccacgtg
gatgatatcgtctatgtggtcaactacacgctgcctgacgagccggaaaactatgtgcac
cgtatcggtcgcaccggccgtgccggcgccgccggggtcgccgtcagttttgcctgcgag
cggggggcattcgccatcccggatatcgaggccttcatcggtcggccgttgccctgcact
gaaccggaggttgatatgctggcgccccttccggaaccatcgatggccgaaaaaaaagga
tcacggcggtccaaccgaccgcgatccggacggaaaaatcgacagagccggccgggatct
tcccggtga

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