Desulfofustis limnaeus: DPPLL_34540
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Entry
DPPLL_34540 CDS
T09067
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
dlm
Desulfofustis limnaeus
Brite
KEGG Orthology (KO) [BR:
dlm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dlm03032
]
DPPLL_34540 (gyrA)
03400 DNA repair and recombination proteins [BR:
dlm03400
]
DPPLL_34540 (gyrA)
Enzymes [BR:
dlm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DPPLL_34540 (gyrA)
DNA replication proteins [BR:
dlm03032
]
Prokaryotic type
DNA Topoisomerases
DPPLL_34540 (gyrA)
DNA repair and recombination proteins [BR:
dlm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DPPLL_34540 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BDD89089
LinkDB
All DBs
Position
3809548..3812013
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AA seq
821 aa
AA seq
DB search
MVETIIPSSEQPSVSIEKELKKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMRELGV
FFNRPYVKSARIVGDVIGKYHPHGDSAAYDTLVRMAQPFSMRYPLVDGQGNFGSLDGDAP
AAMRYTEARMTRIDRELVADIEKETIDFVANYDSSLSEPSVFPSKLPNLLINGSSGIAVG
MATNIPPHNLKEILDALIALIDDPQITVHQLMRIIPGPDFPTGGLICGRAGIREAYETGK
GVITLRARTFIEKTDEGKREQIIIDEIPYQQNKAALVEKIAELIKEKKLSSITEIRDESD
RQGLRIVLELRKDEIAEVVINQLFKMTPMQKSFGIIFLAIVNNRPEVLNLKQMLEHFVQH
RKTVVFRRTRYELKKAEERAHILEGLNKAISNLDEVITLIKESRNPQIAKESLINRFSLS
DIQAQTILDMRLQRLTGLERDKIIQEYKDILVEIARLSELLANEFLIMKVIKEEFLELKS
TYGDDRRTEIVDEVDEILPEDLIAPETMAVTITHSGYIKRNPTSLYRSQGRGGKGIRGVT
NIEEDYVSNIYVASTLDTFLFFTNYGKVFWRKVYQLPLVGRTARGKAIVNLLELSEGEKL
AAILPVSSFEDESRSKSILMVTKSGRMKKTVLNEFQRPLKKGKRALTINEGDEIIGAYLL
QGNDTIFAISKKGMSIHFNEDDIREMGRMAAGVKGITLKDGDYLVGASVLECDSEKTILT
VTSNGYGKRSLVSDYRIQKRGGKGILAIKPSERNGDIVGSHIVDDDKDVILIADSGKMIR
IPIKDIRVIGRTTQGVKLINLETNERVVGMDIVDIENDEEE
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaaacaattataccctcctcagaacaaccttcggtttccatagagaaagagctt
aagaaatcatatctcgattacgccatgagtgtaatcgttgggcgagcgcttcctgacgta
cgagatggcctgaaaccggtccaccgccgagttctctttgccatgagagaacttggcgtg
ttcttcaacaggccttatgtgaaatcggcacgtatcgtcggcgatgtgattggtaaatac
catccccatggggattcggccgcttacgacaccctggttcgtatggcacagccattctcc
atgcgatatcctcttgttgacggacagggtaactttggttcgctcgatggtgacgctcca
gcagctatgcgttacacggaagcgaggatgactagaattgatcgagaactcgttgctgat
atagaaaaagaaacgatcgattttgtcgccaactatgacagttctctttcagaaccttcg
gtgttcccaagtaaattgccgaatctgctgataaatggttcgtctgggattgccgttggt
atggcgaccaacattcctcctcataacctcaaagaaattcttgatgcactgattgctctg
atagacgatccccagatcaccgtgcatcagttgatgagaatcatccccgggccagatttc
cctaccggtggtctcatttgtggtcgagctgggattagagaagcgtatgagaccggaaaa
ggggtaataacattacgagctcgaaccttcatagaaaaaacagacgaagggaaacgtgaa
caaataatcattgatgaaattccttaccaacaaaataaagcagccctcgttgaaaaaatt
gccgagctcatcaaagaaaagaaactttcttcgatcactgagatccgagatgagtcggat
cgacaagggttgaggatcgttttagagctccgtaaagacgaaatcgccgaggtggtcatt
aatcagctttttaaaatgacccccatgcagaaatcattcggtattatctttttggccatc
gtcaataatcgccctgaggttctcaatctgaaacaaatgcttgaacactttgttcagcat
cgtaaaaccgttgttttccgaagaacacgatacgagttgaaaaaggctgaagaaagagcc
cacattctggaaggactcaataaagcgattagtaatcttgatgaggtgattacccttata
aaagaatcaagaaacccacaaatcgcgaaagaaagccttatcaaccgcttcagcctgtca
gatatccaagcacaaaccatcttggatatgagattgcaacgtttaaccgggctcgagaga
gataaaattattcaagagtataaagatatcctcgtcgaaatagccaggttatccgaactg
ttggccaacgagtttttgatcatgaaggttattaaagaagagtttttggaactcaagagt
acctacggagatgacagaagaaccgagatcgtagatgaagtagacgaaattttacctgaa
gaccttattgctcctgaaactatggccgtaaccataactcactcagggtacatcaaacgc
aacccgaccagtctctaccgttctcagggtcgcggtggaaagggtatcagaggcgtaacc
aatattgaagaagattatgtttcaaatatttatgtggcgtcaaccctggatacgtttctc
tttttcaccaattacggcaaggtgttctggagaaaagtatatcaattacccctagtggga
agaacagcccggggcaaggccattgtcaatctcctggaactttctgaaggtgaaaaactc
gcagcaattcttcctgtttcctctttcgaggatgagagccgatctaaaagtatactcatg
gtgactaaatctggtcgtatgaaaaaaacggtattgaacgagtttcaacggccactgaag
aagggaaaacgtgcccttaccatcaacgaaggcgatgaaattattggagcctacttgctg
cagggtaatgacaccatttttgctatatcaaaaaaaggtatgtcaatccattttaacgaa
gacgatatccgtgaaatgggtcgaatggcagcaggagtaaaaggtatcacgctaaaggat
ggagactatttggttggcgcaagcgtcttggagtgcgacagtgagaagacgattctcact
gtcacttcaaacggttatggaaaacgaagtcttgtatctgattatcgaattcaaaagcgt
ggtggtaagggtatccttgccattaaaccgagtgaaagaaatggagatattgtcgggtcc
catatcgtcgatgacgataaagatgtcatactgatagccgactcaggaaaaatgatcaga
attcccattaaagacattcgcgttatcggccgcaccactcagggggtaaagcttataaac
cttgagacaaatgaacgcgtggtcggaatggatatcgtagatattgaaaatgacgaagaa
gaatag
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