Desulfofustis limnaeus: DPPLL_36750
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Entry
DPPLL_36750 CDS
T09067
Symbol
sbcC
Name
(GenBank) nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
dlm
Desulfofustis limnaeus
Brite
KEGG Orthology (KO) [BR:
dlm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dlm03400
]
DPPLL_36750 (sbcC)
DNA repair and recombination proteins [BR:
dlm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DPPLL_36750 (sbcC)
Archaeal homologous recombinant proteins
DPPLL_36750 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
DUF7491
COG6_N
AAA_21
ATG16
MobB
nSTAND3
GTP_EFTU
AAA_15
Motif
Other DBs
NCBI-ProteinID:
BDD89310
LinkDB
All DBs
Position
complement(4042323..4046018)
Genome browser
AA seq
1231 aa
AA seq
DB search
MRILHVRFKNLNSLVGEWEVDLTHPAFLSDTIFAIVGPTGAGKTTILDAICLALYGRTPR
LGKITKSSNEIMSRRTGECFAEVTFETQSGRFRCHWSQHRARKRPEGELQAARHELADAD
TGTIYETKSKEVAEQIEAATGMDFDRFTRSMLLAQGGFAAFLQASPDERAPLLEQITGTE
LYSHLSIRVHERQAEEKKRLQILQMELAGLPILAEAEEKQVRQWLEERNGQDQYLADQIE
QTNQAITWRLDIARLTEELRLIEQARAQLQDRLTAFAPQRARLDAATRALEHNGSAATLS
AMRQEQEADRQALSGCRSSLPERIKRTQRAEQAMKVAAERLQTGKAEQQAMVPIIRQVRD
LDWTMAARNSVIKETEDTITRADSDRDALKTAQAHGSRELAARQTALIAVQQKLEASRMD
GELVEQLAGIASRLENLQQLQARMSRQADDSKQTEQRLAKARRALDEQQKLQKQRQQTVD
HLLAQVTTQQTELKKTLADRNLEGWRQLTANLRHRQEMIGRAQEAARAVNDARSRRVGLT
ERHASLQADLTKRQDRLTSRVERQESLEKEMGLLETQLTLLTAIADLETLRGRLENGTPC
PLCGATEHPYARGAIPVPDQTTARLAAVRADLKTLVAEISALRVELAHLERDRQQTATDL
AACDETISTAEKFLHHAAQELAVAVPPMVVGADRQQFLDALGEENNQRLTSATTILEAAV
HTEQSLTVVRDQLDLAKESRFQAEKACQAAAHAVESTDELLKQQEKEADEFRSRLEQDRS
ALAERLRPFAVETLDLDTLEETLRLLTDRRDQWVTRQQEQDRLTKELSALQLTTAHQAEQ
IERREKELGNLRDRLTELNRQKRELDAERTRLFGCKNPDEEEARLAATIEAAEQEWDRTR
VQWEAAQQDLTRLQGRISDLEQALRTRGNHLETATVTFLTQLQESGFRDEEAYRSVCLPE
QERIKLAAQAQRLTEENSGLLAQQREKAELLHRLQHKELAVEPLTELQQRQAALVERQKE
LQREIGGLRHQLAENEERKRRQQDQARAVEAQQREWARWDQLHQLIGSADGKKFRNFAQG
LTFAIMVDQANRQLQTMSDRYLLIRTDDQPLELKVLDTYQAGEIRSTKNLSGGESFIVSL
ALALGLSHMASRNVRVDSLFLDEGFGTLDEEALDTALDTLTSLQQEGKVIGIISHVQPLR
ERISTRIQVSPMTGGRSRISGPGCRRLDVSV
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcctgcacgtacggttcaagaacctcaattccttggtcggcgaatgggaggtc
gacctgactcacccggcctttctgtccgacaccattttcgccattgtcggaccgaccgga
gccggcaagacgaccatcctagacgccatctgcctcgcgctctatggccggactccccgg
ttgggcaagattaccaaaagcagcaacgagatcatgtcgcggcggaccggggaatgcttt
gccgaggtgaccttcgagacccagtcgggtcgcttccgctgccactggagtcagcaccgg
gctcgaaaaagaccggaaggtgagctgcaggctgccagacatgaactggccgacgccgat
accggtaccatctatgaaacaaagagcaaggaggtcgccgaacagatcgaggcggccacc
ggcatggacttcgaccgctttacccgctccatgctgctggctcagggcgggttcgccgct
tttctccaggcgtcccccgacgaacgggcacccctgttggagcagatcaccggtacggaa
ctctacagccatctgtccatccgcgtgcacgagcgccaggctgaagagaaaaaacggtta
cagattttacaaatggagcttgccggcctgccgattttagcagaagctgaggaaaaacag
gtccgtcagtggctggaggaacgcaacggccaggatcaatacctggccgatcagatcgag
cagacgaaccaggccatcacctggagactggacatcgcacggcttaccgaggagttgcgc
ctgatagaacaggcccgtgcacagctgcaggatcgcctgacagcctttgctccgcaacgt
gcccggctcgatgccgccacccgtgcccttgagcacaacggcagtgccgccactctttcc
gccatgcgccaggaacaggaagccgaccggcaagcgctgtcgggctgccgctcctccctg
cccgaaaggatcaagcgaacccagcgagcagagcaggcgatgaaggtagccgccgaacga
ctgcaaaccggcaaagccgagcagcaagccatggtgccgatcatccgtcaggtccgtgat
cttgattggaccatggcagcccggaactccgtcatcaaggagaccgaagacaccatcact
cgagccgactccgaccgcgacgctctgaaaaccgcgcaggcgcatggcagccgagaactc
gccgccaggcaaacggccctgatagccgtccagcagaaactggaggcgtcccggatggac
ggtgaactggtcgagcagcttgccgggatcgccagccgtctggaaaacctgcaacagctg
caggcccggatgagtagacaagcagacgatagcaaacaaaccgaacagcgtttagccaag
gctcgtcgcgccttggatgagcaacagaagctgcagaaacagcggcagcaaacagtcgac
cacctgctggcccaggtgacgacccaacagaccgagctgaagaagacgcttgccgatcga
aatctggaggggtggcggcagttgaccgccaatttgcgccatcgtcaggagatgattggc
cgggcccaggaagcggcccgggccgtcaacgacgcacggtcgcgccgtgtcggactcacc
gaacgtcatgcgagcctgcaggcagacttaaccaaacgacaagaccgccttaccagccgg
gttgagcggcaggagtcgctggaaaaggaaatgggactgctggaaacgcagctcaccctg
ctgaccgccatagcggatctggaaacgctgcgcggccgtctcgagaacggcaccccctgc
cccctgtgcggcgccaccgaacatccctatgcgcgcggtgccattcctgttcctgatcag
accacggcgcgcctggcagccgttcgtgccgacttgaagaccttagtggccgagatttcc
gcactgcgagtcgagttggcccacttggagagagatcgccaacaaaccgccaccgacctg
gcagcatgcgacgagacgatcagcaccgccgagaaattcctccatcacgcagcacaggaa
ctggcggtggctgttcccccgatggttgtcggggccgatcggcaacaatttctcgacgcg
cttggcgaagaaaacaaccaacgcctgacctccgccaccaccatactggaagcggcggtc
cataccgagcagagcctaacggtggtgcgtgaccaactcgatctggccaaggagtcgcgc
ttccaggcggagaaagcatgccaggctgccgcccacgcggtagaatcgaccgatgaacta
ctgaaacaacaggagaaagaggccgacgaattccggtcacggctggaacaggatcgttct
gcgctggcggaaagattgcggccttttgcggtcgagaccctcgatctcgacacgttggaa
gaaacgctgcggcttttaaccgaccgccgtgaccaatgggtcacccggcaacaggagcag
gatcgactcaccaaagaactgtcagcgctccagctgaccaccgcccaccaggctgagcag
attgagcgccgggaaaaagagcttggtaacctccgggatcggctcaccgaattgaaccgg
caaaaacgagaactcgacgcagagcgaaccaggcttttcgggtgcaaaaacccggacgag
gaggaggcgcggctcgccgcaacgatcgaagcagcagagcaggaatgggatcggacacga
gtccagtgggaagcggcacaacaggatctgactcgtcttcagggcagaattagcgatctg
gagcaagcgcttagaactcgcggtaaccatctggagacggcaaccgtcacctttctgacg
cagctgcaagaatccggttttcgcgacgaagaggcgtatcgctcagtctgtctccccgaa
caggagcggataaaactggccgcccaggcccaacggctcaccgaggaaaacagcgggctt
ctcgcccagcaacgggaaaaggccgagctcctgcaccgcctgcaacacaaggaactggcc
gtggaaccgctgacggaactccagcaacgccaggctgcactggtcgaacgacagaaagaa
ctgcagcgcgaaatcggcggcctgcgtcaccagcttgcggaaaacgaggagcgcaagcgc
cgacagcaggatcaagcgcgtgcggtagaggcgcaacagcgggaatgggcacgctgggat
cagttacaccagttgatcggctcggccgacggcaagaaattcaggaattttgcgcaaggc
ctgacctttgccatcatggtcgaccaggccaatcgacagctgcaaaccatgagcgaccgc
tacctgctcatccgtaccgatgaccagccactggagctcaaagtactcgacacctaccag
gcgggcgaaattcgctccaccaaaaacctctccggcggcgagagcttcatcgtcagtctg
gcactggccctcggcctatcgcacatggccagcaggaacgtacgggtcgattctctgttt
ctcgatgaaggattcgggacactcgatgaagaagcactcgacaccgcgctggacaccctg
accagcctgcagcaggaaggtaaggtgatcggcatcatttctcacgtgcaacctctccgg
gagcggatctccacccggatccaggtaagtccgatgaccggcggaagaagtcggatttcc
ggtcccggctgccgccgactggacgtttctgtctaa
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integrated database retrieval system
