Desulfofustis limnaeus: DPPLL_37850
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Entry
DPPLL_37850 CDS
T09067
Symbol
rsmB
Name
(GenBank) ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
dlm
Desulfofustis limnaeus
Brite
KEGG Orthology (KO) [BR:
dlm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dlm03009
]
DPPLL_37850 (rsmB)
Enzymes [BR:
dlm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
DPPLL_37850 (rsmB)
Ribosome biogenesis [BR:
dlm03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
DPPLL_37850 (rsmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
Cons_hypoth95
Methyltransf_31
Met_10
FtsJ
Methyltransf_25
Methyltransf_5
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
BDD89420
LinkDB
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Position
complement(4162157..4163371)
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AA seq
404 aa
AA seq
DB search
MHLVFGVLRHRDQLDFLVAQLCARPTGQIHPWVRQALTVGLYQIFFLDRTPTFAAVNETV
EALRQAGLPKKLLGFTNAILREALRRKEVLAASIIADPGNPPLLNHPAWLTERWQAHFGA
DIMQAICAHNNREPILCLRAVHAYGREPLRHLFQKAGLNTENGAVAPESVLLPDFHGEIP
SLPGFQDGLFQIQDQSAQLATYLLAPFSAGRRYLDCCAGLGGKTTHLAELVSSQGSAIMA
LEPDPGRFRLLQENLARCRSQTTVSVRMQTLEDFCRSCTSRFDAVLIDAPCSGTGVIGRQ
PDIRWNRRAEELPRYQQRQRALLKLAATLLVPGGILVYATCSIEPEENQQVVAGFLNEFP
AFRLTDCREFLASTAHHLVSEGFFRPLPGRGQDGFFAARLLRKG
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgcatctggtgttcggagttctccgccatcgggaccaactcgacttcctcgtcgcgcag
ttgtgcgccaggcccaccggacagatccatccatgggttcgccaggcgttaaccgtcggc
ctctatcagatctttttcctggaccgtactcccaccttcgctgccgtcaacgagaccgtt
gaggcgctccgccaagccggactaccgaaaaagcttctcggctttaccaatgcgattctg
cgcgaagctctgcggcgcaaagaggtgcttgctgcgtccatcatcgccgaccctggcaac
ccgccgctgctcaatcaccccgcctggctcaccgagaggtggcaagcccattttggcgca
gacatcatgcaggccatctgtgcccacaacaatcgtgaaccaattctctgcctgcgcgcc
gtgcatgcctacggcagggagcctcttcggcatctgttccagaaggcgggtctaaacacc
gaaaacggagcggtggccccggaaagcgttcttttgcccgactttcacggagagatcccg
tcgcttcccggcttccaggatggcctcttccagatccaagaccagtcggcacaactggcc
acttacctgcttgccccgttttctgccggtcgacgatacctcgactgctgcgctggtctc
ggcggcaagaccacccaccttgccgaactggtttcttcgcagggctcggcaatcatggcg
ctggaacccgacccgggacgtttccggttgctccaggaaaatctggcacgctgccgctcc
cagaccaccgtttcggtgcggatgcagaccctggaagatttttgccgatcctgcaccagc
cgcttcgacgcagtgctgatcgatgccccgtgctccgggaccggcgttatcggtcgccag
cctgacatccgctggaatcgcagggcggaagaactgccccgctaccagcagaggcaacgc
gctctcctcaagcttgccgccaccctcctcgtcccgggcggcatactggtctacgccacc
tgctccatcgaaccggaggagaaccaacaggtggtagccggattcctgaatgaatttcct
gccttccggttaactgactgccgggagttcctcgcctcgacggcccaccacctggtctct
gagggttttttccgtcccttgccgggtcgtggccaggatggcttctttgccgctcgtctg
ctccgaaaggggtga
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