Dorea longicatena: K5I24_00005
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Entry
K5I24_00005 CDS
T08069
Name
(GenBank) DEAD/DEAH box helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
dlo
Dorea longicatena
Pathway
dlo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dlo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
K5I24_00005
09124 Replication and repair
03420 Nucleotide excision repair
K5I24_00005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dlo03021
]
K5I24_00005
03400 DNA repair and recombination proteins [BR:
dlo03400
]
K5I24_00005
Enzymes [BR:
dlo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
K5I24_00005
Transcription machinery [BR:
dlo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
K5I24_00005
DNA repair and recombination proteins [BR:
dlo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
K5I24_00005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
PDDEXK_1
Helicase_C
IstB_IS21
PhoH
MutL_C
Motif
Other DBs
NCBI-ProteinID:
UOX54108
LinkDB
All DBs
Position
join(3442528..3442572,1..2322)
Genome browser
AA seq
788 aa
AA seq
DB search
MNLEQPCIRISVRNLVEFILRHGDIDNRTGGADKEAMQQGGRIHRKIQRQQGAEYRAEVP
LKYQIACDGFILSVEGRADGIIELPKRVVIDEIKGVFKDLKRLKEPQLLHLAQAKCYAYI
YAEQKNLEEIGVQMTYCNLDTEEIRRFQEVYTRAELKKWFEELVSEYEKWARYQMEWRAK
RNASIKTVEFPFEYRDGQKKLVASVYRTILRKKKLFIQAPTGVGKTMAAVFPAVKAVGEE
LGEKIFYLTAKTITRTVASQAFEILRKQDLKMKVITLTAKEKICFCEETICNPDACPYAK
GHFDRVNAAVYELLTSTDEMSREVLEEQARKWNVCPFEMALDVSQWVDAVICDYNYVFDP
NAHLKRFFGDGVKGEYLFLIDEAHNLVERGRTMYSTSICKEDFLKIKKLVKYGEPKLVSA
LESCNKQLLELKRECDGCQILNSVSHVYIKLLSLMTKLEEFIEDCKDEVIRKGVLEFYFG
IRNFIYIHDRLDENYLIYSELSEEGKFYLHLFCVNPAGCLQEYMGKGNSTILFSATFLPI
NYYKKLLSAAKDDYAIYAESPFEQSKRLLLLGNDVSTKYTRRGPEMYRKYAEYMMRVIKG
RTGNYLAFFPSYRFLEEVWETFMELPQEQIEVAVQSQYMTEQEREEFLKKFEQERAHSLI
GFCVMGGIFSEGIDLTEDKLIGAMIIGTGLPQVCLERELLKYYFDRKNLNGFDYAYLYPG
MNKVLQSAGRVIRTDQDRGVIALLDERFMDRRCQEVFPREWNDFQICNSENIEEKIAGFW
KEEQMDKR
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgaatctggaacaaccatgtatccgcatttcagtgcggaatctggtggaatttatattg
agacatggagacattgacaaccggaccggtggggcagataaggaggctatgcagcagggc
ggccggatacaccggaaaatccagagacagcagggggcagagtaccgtgcagaggtcccg
ttaaagtatcagatagcgtgcgatggatttatcctgagtgtagaaggaagagcggacggg
atcatagaacttccgaagcgtgtggtgatcgacgagatcaaaggagtatttaaggatttg
aaacgtctgaaagaaccgcagcttttacatttggctcaggcaaaatgctatgcctatatc
tatgcagaacagaaaaatctggaagaaatcggagtacagatgacgtattgtaatttagat
accgaagaaatccggagattccaggaggtatatacccgggcagaacttaagaaatggttc
gaagaacttgtatcagaatatgaaaaatgggcaagataccagatggaatggagagcaaag
agaaatgcttcaatcaaaacagtggaattcccattcgaatatagagacggacagaagaaa
ctggttgcgtcggtatacaggacaattttgagaaaaaagaaattatttatccaggcaccg
accggagtcggcaagacaatggcggccgtatttccggcggtgaaagcagtcggggaagaa
ctgggagaaaagatcttttatctgacggcgaagacgatcaccagaacggtggcaagtcag
gcattcgagatcctgagaaagcaggatctgaagatgaaagtcatcacattgacggcaaaa
gaaaagatctgtttctgtgaggaaactatctgtaatccggatgcatgtccatatgccaaa
ggacattttgaccgtgtaaatgctgctgtttatgaactgctcacatcgacagatgagatg
agccgggaagtgctggaagaacaggcaaggaaatggaatgtgtgtccgtttgaaatggca
ctggatgtatcgcagtgggtagatgcggttatatgtgattataattacgtctttgatccg
aatgcacatctgaaacgctttttcggagacggcgtcaaaggagaatatctgtttctgatc
gatgaggcacacaatctggtcgaacgtgggagaaccatgtacagcaccagtatttgcaag
gaagattttctgaaaatcaaaaagctggtaaaatacggagaaccgaaacttgtctcggcg
ttggagagctgcaataagcagcttctggagttaaaaagagaatgtgacggctgccagata
ctgaatagtgtgtcacatgtgtatattaagctattgtctttgatgacaaagctggaagag
tttatagaagactgtaaagatgaagtaatacggaaaggggtactggagttttactttggt
atccgtaatttcatatatattcatgaccggctggatgaaaattatctgatttattcagaa
ctaagtgaagaaggaaagttttacctgcatctgttctgtgtcaatccggcgggatgcctg
caggaatatatgggaaaaggaaatagtacgatattattttcggcaacatttcttccaatc
aattattataagaaactgttatctgcggcaaaggatgattatgcgatctatgcagaatct
ccatttgaacaaagcaaaagattactgcttctgggaaatgatgtcagcacgaagtatacc
agacgcggaccggagatgtaccgtaagtatgcagaatatatgatgcgtgtgataaaagga
agaacaggaaattatcttgcctttttcccgtcttaccgatttctggaagaagtgtgggaa
acattcatggaactgccgcaggaacagattgaagttgcagtacagtcccaatatatgacg
gagcaggaacgggaagaattcctgaaaaaattcgaacaggaaagagcacacagcctgatc
ggcttctgtgtgatgggtggtattttttcagaaggaattgatctgacggaagataaactg
atcggggcaatgatcatcgggacaggacttccgcaggtgtgtctggaacgggaactttta
aagtattattttgaccggaagaatctgaatggattcgattatgcttatttgtatccgggc
atgaataaggtgctacagtcggcaggacgagtcatccggactgatcaggacagaggggtg
attgcacttttggatgaacgttttatggaccggcggtgccaggaggtgtttccgagggag
tggaatgatttccagatctgtaacagtgaaaatatcgaagaaaagatagcagggttctgg
aaggaagaacagatggataagaggtaa
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