Dorea longicatena: K5I24_00990
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Entry
K5I24_00990 CDS
T08069
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dlo
Dorea longicatena
Brite
KEGG Orthology (KO) [BR:
dlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dlo03016
]
K5I24_00990 (truB)
Enzymes [BR:
dlo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
K5I24_00990 (truB)
Transfer RNA biogenesis [BR:
dlo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K5I24_00990 (truB)
Prokaryotic type
K5I24_00990 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
INT_rpt
TAL_FSA
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
UOX54285
LinkDB
All DBs
Position
195312..196211
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AA seq
299 aa
AA seq
DB search
MIHGIINVYKEKGFTSHDVVAKLRGIVGQKKIGHTGTLDPDATGVLPVCLGKATKLCDLL
TDKNKTYEAVLLLGKTTDTQDITGEVLEEKSTEALTEEKVREAIEGFIGDYEQIPPMYSA
LKVNGKKLYELAREGKVIERKARLVKILDIQILEIDLPKVRMEVSCSKGTYIRTLCHDIG
EKLGCGGCMESLIRTRVSTFRIEDAKTLDEIETLKQEGKLAELLVPIDAMFPSYPKITVK
DDWKAFAKNGNPLDLKMLKEACGQDEETQVRLYDESGKFIAIYQWKEKKYHIVKMFFNE
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgatacacggaattatcaatgtgtataaagaaaagggatttacatcccatgatgtggtg
gcgaaacttcgcgggatcgtcggacaaaagaagatcggacatacagggacacttgatccg
gatgcgacaggtgtccttccggtgtgtcttggaaaagcaaccaagctttgtgatcttttg
actgacaagaacaagacatatgaagcagtgttgcttcttggcaagacaacggatacacag
gatattacaggtgaagttctggaagaaaagtcaacagaggcactgaccgaagaaaaagtc
agagaagctattgaaggatttatcggagattatgaacagattcccccaatgtattcggct
cttaaggtaaatggaaagaaattatatgagcttgccagagaaggaaaggtcatagagaga
aaagcgcgtctggttaagattctggatattcagattcttgagattgatcttccgaaagtc
cgtatggaagtatcgtgttcgaaagggacctacatccgtacgctttgtcatgatataggt
gagaagctcggatgcggaggctgcatggaatcactgatccgtacaagggtgtcaacgttc
cggattgaagatgcgaaaacgctggatgaaatcgaaaccttgaagcaggaaggaaagctt
gcagagcttctggtaccgatcgatgcgatgttcccgtcttatccgaagatcacggtgaaa
gatgattggaaggcatttgctaagaatgggaatcctctggatcttaaaatgttaaaagag
gcatgcggacaagacgaagaaactcaggtgcgtctgtatgatgagtcgggtaaattcatc
gccatttaccagtggaaagaaaaaaaataccacatcgtcaagatgttttttaacgagtaa
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