Dorea longicatena: K5I24_01005
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Entry
K5I24_01005 CDS
T08069
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dlo
Dorea longicatena
Pathway
dlo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K5I24_01005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dlo03019
]
K5I24_01005
03016 Transfer RNA biogenesis [BR:
dlo03016
]
K5I24_01005
Enzymes [BR:
dlo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
K5I24_01005
Messenger RNA biogenesis [BR:
dlo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
K5I24_01005
Transfer RNA biogenesis [BR:
dlo03016
]
Prokaryotic type
tRNA degradation factors
K5I24_01005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
KH-I_KHDC4-BBP
KH_KhpA-B
KH_NusA_1st
KH_PNO1_2nd
Orthopox_A49R
Motif
Other DBs
NCBI-ProteinID:
UOX54288
LinkDB
All DBs
Position
197888..199975
Genome browser
AA seq
695 aa
AA seq
DB search
MYKTFEMELAGRPLKVDVGRVAKQANGAVLMHYGDTTVLCTATASEKPRDGIDFFPLSVE
YNERMYAVGKIPGGFNKREGKASENAILTCRVIDRPMRPLFPKDYRNDVTLENLVLSVDQ
DCAPELTAMLGAAIATTISDIPFDGPISTTQVGLVGGEFVFNPTAAQRAVSDMALTVAST
REKVIMIEAGANEVPEQQMIDAIFAAHELNQKVIAFIDTIVAECGKQKHEYESCAVPEEL
FAAIKEIVTPEEMEVAVFSDDKQTREENIRVVTEKLEEAFAENEEWLAVLPEAVYQYQKK
TVRKMILKDHKRPDGREIDQIRPLAAEVDLIPRVHGSAMFTRGQTQICNICTLAPLSEAQ
KLDGLDEAETTKRYMHHYNFPSYSVGETKPSRGPGRREIGHGALAERALLPVLPSEAEFP
YAIRTVSETFESNGSTSQASVCASSMSLMSAGVPIKAAVAGISCGLVTGDTDDDYLVLTD
IQGLEDFFGDMDFKVAGTHKGITAIQMDIKIHGLTRPIIEEAIAKTRKARLYIIDEVMNK
AIDAPRAQVGEFAPKIVQMQIDPQKIGDVVGQRGKTINAIIEQTGVKIDITDDGAVSICG
TDAKSMEEAQKLIHIIVTDFEAGQVLEGKVVSIKDFGAFLEFAPGKEGMVHISKLSKERV
NRVEDVLTLGDVVKVVCLGKDKMGRISFSMKDVAE
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaacatttgaaatggaactcgccggaagacctttaaaagttgacgtaggcaga
gttgcaaaacaggcaaatggtgctgtattaatgcattacggtgacacaactgtactttgt
acagcaactgcttcagagaagccaagagacggaatcgatttcttcccactgagcgtggaa
tacaacgaaagaatgtatgcagtaggaaagattcctggaggattcaataagagagaagga
aaagcatctgaaaatgctatccttacatgccgtgtaatcgaccgtccgatgagaccactg
ttcccaaaggattaccgtaacgatgtaacactggagaaccttgtattatctgtagatcag
gactgtgctccggagcttacagctatgcttggtgcagcaatcgcaacaacaatttccgat
atcccgtttgacggaccgatctctactacacaggtaggtctggtaggcggagaattcgta
ttcaaccctacagcagctcagagagcagtatctgatatggctttaacggttgcttctaca
agagagaaagtcattatgatcgaagccggagcaaacgaagttccagagcagcagatgatc
gatgcaatctttgcagcacatgaattaaaccagaaagtaatcgcattcatcgatacaatt
gtagcagagtgtggaaaacaaaaacacgaatatgaaagctgtgcagttccggaagaactc
tttgcagcaatcaaagagatcgttactccggaagagatggaagtagcagtattctctgat
gataaacagacaagagaagaaaatatccgtgtcgtaacagaaaagttagaagaagcattt
gctgaaaatgaagagtggcttgcagttcttcctgaggctgtataccagtaccagaagaag
acggtacgtaagatgatcttaaaagaccacaaacgtccggacggaagagagatcgaccag
atcagaccacttgcagcagaagttgatttgattcctagagtacatggttctgcaatgttc
actcgtggacagacacagatctgcaacatctgtacattggcaccactttctgaagctcag
aaactggatggtctggatgaagcagagacaacaaagagatatatgcaccactacaacttc
ccatcatactctgtaggtgagacaaagccatccagaggaccgggacgtcgtgagatcgga
catggagcactggcagagcgtgcattgcttccggtacttccaagcgaagcagaattccca
tatgcgatccgtactgtatctgagacatttgaatcaaatggttctacttctcaggcaagt
gtatgtgcatcttctatgtcactgatgtcagcaggtgtaccgatcaaggctgcagtagcc
ggaatctcatgtggactggttacaggtgatacagatgatgattatcttgtacttacagat
attcagggactggaagacttcttcggagatatggacttcaaggtagccggtacacacaaa
ggtatcacagcgatccagatggatatcaagatccatggactgacaagaccaattattgaa
gaagctatcgctaagacaagaaaagcaagactttacattattgatgaagttatgaataaa
gcaatcgatgctccaagagcacaggttggagaattcgctccaaagatcgttcagatgcag
atcgatccacagaagatcggcgatgtagtcggacagcgtggaaagacaatcaacgcgatc
atcgagcagacaggcgtgaagatcgacatcacagacgacggtgccgtatctatctgcgga
acagatgctaagagcatggaagaagcgcagaagctgatccacatcatcgtaacagatttc
gaagcaggacaggttctggaaggaaaagttgtcagcatcaaagacttcggcgcattcctt
gaatttgcacctggaaaagaaggaatggtacacatttctaagctttccaaagaaagagta
aaccgcgtagaagacgttctgacacttggcgatgttgttaaggttgtatgccttggcaag
gacaagatgggaagaatctcattttctatgaaggatgtagcggaataa
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