Dorea longicatena: K5I24_03120
Help
Entry
K5I24_03120 CDS
T08069
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
dlo
Dorea longicatena
Pathway
dlo00260
Glycine, serine and threonine metabolism
dlo00460
Cyanoamino acid metabolism
dlo00630
Glyoxylate and dicarboxylate metabolism
dlo00670
One carbon pool by folate
dlo00680
Methane metabolism
dlo01100
Metabolic pathways
dlo01110
Biosynthesis of secondary metabolites
dlo01120
Microbial metabolism in diverse environments
dlo01200
Carbon metabolism
dlo01230
Biosynthesis of amino acids
dlo01240
Biosynthesis of cofactors
dlo04981
Folate transport and metabolism
Module
dlo_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
dlo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
K5I24_03120
09102 Energy metabolism
00680 Methane metabolism
K5I24_03120
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
K5I24_03120
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
K5I24_03120
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
K5I24_03120
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
K5I24_03120
Enzymes [BR:
dlo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
K5I24_03120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
UOX54685
LinkDB
All DBs
Position
complement(642388..643626)
Genome browser
AA seq
412 aa
AA seq
DB search
MYAFDEIKKADSEIADAIQAEMERQNSHLELIASENWVSKAVMAAMGSPLTNKYAEGYPG
KRYYGGCQCVDVVENLARERAKKLFGCDYANVQPHSGAQANLAVFFAMLEPGDKVMGMNL
DHGGHLTHGSPVNISGKYFNVVSYGVNDEGVIDYDKVREIAVKEKPKMIIAGASAYARII
DFKKFREIADEVGAYLMVDMAHIAGLVAAGLHPSPIPYADVTTTTTHKTLRGPRGGLILC
NQEAADKFNFNKAVFPGIQGGPLEHVIAGKAVCFKEALEPEFAEYQKQIIKNAQALSKGL
MDRGVKIVSGGTDNHLMLIDLRGEDVTGKELEKRLDAAHITCNKNTVPNDPRSPFVTSGV
RLGTPAVTTRGLKEDDMDMIAECIALVLQSEDNIEKVKGMVAELTAKYPLDM
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcatttgatgaaattaaaaaagcagacagtgaaattgcagacgccattcaggcc
gagatggagagacagaattcgcatctggagctgattgcatcggagaactgggtaagcaaa
gcagtcatggcagcaatgggaagtccgcttacaaataaatacgcagaaggctatccgggc
aaacgttactatggtggatgtcagtgtgtggatgtagtggaaaatcttgcaagagaaaga
gcaaagaagttatttggctgtgattatgccaatgtacagccacattccggagcacaggca
aatctggcagtattctttgcaatgctggagcctggagacaaagtcatgggtatgaacctg
gatcatggcggacatctgacacatggttctccggttaatatttccggtaaatatttcaac
gtcgtatcatacggagtgaacgacgagggtgtgatcgattatgataaggtacgtgagatc
gcagtaaaagaaaaaccaaagatgatcattgcgggagcaagtgcttatgcaagaatcatt
gatttcaaaaaattccgtgagatcgcggatgaagtaggagcatacctgatggttgatatg
gcccatatcgcaggacttgttgcagcaggacttcatccaagcccgatcccgtacgcagat
gtcacaacaacgacaacacataagacactgcgcggaccaagaggcggtctgatcctctgt
aatcaggaagcagcagataaattcaactttaataaagctgtattccctggaatccaggga
ggaccactggaacacgtgatcgcaggaaaagcggtatgcttcaaagaagccctggagcct
gaattcgcagaatatcagaaacagatcatcaaaaatgcacaggcactcagtaagggactg
atggaccgtggagtgaagattgtatccggaggaacagataatcacctgatgctgattgat
ttaagaggagaagatgtgaccggtaaagaactggaaaaacgtctggatgccgcacacatc
acatgtaacaaaaatacggtaccgaacgatccaagatcaccattcgtgacaagcggtgtc
agacttggaacaccggcggttacaacaagaggattaaaagaagacgacatggatatgatc
gcagagtgtatcgcactcgtacttcagagtgaagataacattgaaaaagtcaaaggaatg
gttgcagagctgactgcaaaatatcctctggatatgtaa
DBGET
integrated database retrieval system