Dorea longicatena: K5I24_03955
Help
Entry
K5I24_03955 CDS
T08069
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
dlo
Dorea longicatena
Pathway
dlo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K5I24_03955 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dlo03400
]
K5I24_03955 (uvrA)
DNA repair and recombination proteins [BR:
dlo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K5I24_03955 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K5I24_03955 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
RsgA_GTPase
nSTAND1
AAA_21
AAA_33
AAA_25
BCA_ABC_TP_C
NACHT
cobW
DUF7575
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
UOX54841
LinkDB
All DBs
Position
complement(833889..836732)
Genome browser
AA seq
947 aa
AA seq
DB search
MSQEKDSRQYIKIRGANEHNLKNIDVDIPRDKLVVLTGLSGSGKSSLAFDTIYAEGQRRY
MESLSSYARQFLGQMEKPDVESIEGLSPAISIDQKSTNRNPRSTVGTVTEIYDYFRLLYA
RVGIPHCPKCGREIKKQTVDQMVEQIMGMPERTKIQLLAPVVRGRKGTHAKLLDRAKKSG
YVRVKIDGNMYELSEEIKLDKNIKHNIEIVVDRLVVKEGIEQRLTDSIENVLNLAEGLMT
VDVIGGEPVQFSESFSCPDCGISIEEIEPRSFSFNNPFGACPECFGLGYKMEFDEDLMIP
DKRLSISEGAITVMGWQSCTDKKSFTYAILDALSKEYDFSLDTPFEDYPKEIHDVLLHGT
NGKEVKVYYKGQRGEGVYDVAFEGLIKNVERRYRETGSETMKAEYEEFMNITPCHACKGQ
RLKPGALAVTVGDKNIAELTGMSIEKLQAFLKELKLTNHQMLIGGQILKEINSRIQFLMD
VGLNYLTLGRATGTLSGGEAQRIRLATQIGSGLVGVAYILDEPSIGLHQRDNDKLLGTLK
HLRDLGNSVIVVEHDEDTMREADFIVDIGPGAGEHGGEVVATGNAEEIMQNEKSVTGAYL
SGRIKIPVPETRREPTGWLKVLGAQENNLKNIDVSFPLGVMTCVTGVSGSGKSSLVNQIL
YKRLARDLNRARTIPGKHKGIEGLDQLDKVINIDQSPIGRTPRSNPATYTGVFDLIRDLF
AATPDAKARGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVPCEVCKGKRYNRET
LEVKYKGKSIYDVLDMTVEEAMHFFENVPSIRRKMETLYDVGLSYIRLGQPSTTLSGGEA
QRIKLATELSKRSTGKTIYILDEPTTGLHFADVHKLTEILHRLTADGNTVIVIEHNLDVI
KTADYIIDIGPEGGDKGGTVIASGTPEEVAESPVSYTGKYIKPMLGR
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaggaaaaagattcaagacaatatatcaaaatcagaggagccaatgagcataat
ctgaagaatatagatgtagatataccaagagacaagctggtagttctgactggactcagt
ggttcgggaaaatcatcgttggcatttgatacaatctatgcggaagggcagagaagatac
atggaatccctgtcctcttatgcaagacagttcttaggacagatggaaaagccggacgta
gaaagcatcgaggggctttccccggcgatttccattgaccagaaatctacgaaccgtaac
ccaagatccaccgtaggaaccgtaacggaaatctatgattatttccgtttattatacgca
agagtcggaataccgcactgtccgaaatgtggccgcgagatcaaaaagcagacggttgac
caaatggtagaacaaatcatgggaatgccggagagaaccaagatccagcttctggccccg
gttgtaagaggaagaaaaggaacccatgccaaattactggatcgtgccaagaagagcggt
tatgtccgcgtcaaaattgacggtaatatgtacgaactttcagaagagattaagctggat
aagaatatcaaacacaatattgaaattgtggtagaccgtctggtagtaaaagaaggcatc
gaacagcgtctgaccgactccattgaaaatgtactgaatctggcagagggactgatgacc
gtagatgtgatcggcggagagccggttcagttcagtgaaagtttttcatgcccggactgc
ggaatcagtatcgaagagattgaaccgagaagcttttcgttcaacaatccatttggagcg
tgcccggaatgtttcggacttggatataagatggaatttgatgaggatctgatgatcccg
gacaaacgtctcagcatcagcgaaggtgccattacagttatgggatggcagtcctgcaca
gacaaaaaaagcttcacttatgcaattttggatgcattaagcaaagaatacgatttttcg
ctggacactccatttgaagactatccgaaagaaattcacgatgttctgcttcatggaacg
aatggaaaagaagtcaaagtatattataagggacagcgtggagaaggtgtctacgatgtt
gcgtttgaaggattgatcaagaatgtagaacgccgttaccgggagactggttcggaaact
atgaaagcggaatatgaagaattcatgaatattacaccgtgtcatgcctgcaagggacag
cgtctgaagccgggagcactggctgttacggtaggagataagaatattgcagaactgaca
ggaatgtcgatcgagaaactgcaggcatttctgaaagaactgaagctaacgaatcatcag
atgctgatcggcggacagatcctgaaagagatcaattccagaatccagtttctgatggat
gtcggactgaactatctgacacttggaagagcaactggaacactgtccggcggagaagca
cagagaattcgtctggcgactcagatcggttccggacttgtaggtgtagcatatattctg
gatgagccaagtatcggtctgcatcagagagacaatgataaattacttggcacattgaag
catttgcgtgaccttggtaattccgtaatcgtagtcgagcatgatgaggatacgatgaga
gaagcggattttattgtggatatcggtccgggcgcgggagagcacggcggcgaagtggtt
gcaacgggaaatgcagaagaaatcatgcagaatgaaaaatctgtaaccggagcctatctg
agcggaagaatcaagattccggttccggagacaagaagagaaccaaccggatggttgaaa
gtactcggagcacaggaaaataacctgaagaacattgatgtcagcttcccacttggcgta
atgacctgtgtaacgggtgtgtccggatcgggaaaaagttcgctggtgaatcagatcctt
tacaagcgtctggcaagagacctgaatcgtgcaagaactattccgggcaaacataaaggc
attgaaggactggatcaattagataaagttatcaatatcgaccagtctccgatcggacgt
acgcctagatctaacccggcaacctatacgggagtattcgacctcataagagatctgttc
gcagcaacaccggatgcgaaggcaagaggctataaaaaaggaagattcagctttaatgtc
aaaggaggacgctgcgaagcctgcagcggagacggaatcatcaagatcgagatgcatttc
ttgccggatgtctacgttccatgtgaagtatgtaagggaaaacgttataacagagagact
ctggaagtaaaatataaaggcaaaagcatttatgatgtgctggatatgacagtagaagaa
gctatgcatttcttcgaaaatgtaccaagcatccgcagaaagatggagactttatatgat
gtcggactttcttatatccgtctgggacagccgtccacgacgctgtccggaggagaagca
cagcgtatcaagctggcaacggaactgagtaagagaagtacaggaaagacaatctatatt
ctggatgagccgacgacaggactgcattttgctgatgtgcataagctgacagagattctg
cacagactgacagctgatggtaatacggttattgtgatagagcataatctggatgttata
aaaactgcagattatattattgatatcggaccggaaggcggtgacaaaggtggaaccgtg
atcgcaagcgggacaccggaagaggtagcagaaagtcctgtgtcttatacaggaaagtat
ataaaaccgatgttaggaaggtag
DBGET
integrated database retrieval system
