Dorea longicatena: K5I24_13840
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Entry
K5I24_13840 CDS
T08069
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dlo
Dorea longicatena
Pathway
dlo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K5I24_13840 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dlo03019
]
K5I24_13840 (recQ)
03400 DNA repair and recombination proteins [BR:
dlo03400
]
K5I24_13840 (recQ)
Enzymes [BR:
dlo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K5I24_13840 (recQ)
Messenger RNA biogenesis [BR:
dlo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K5I24_13840 (recQ)
DNA repair and recombination proteins [BR:
dlo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K5I24_13840 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HRDC
RQC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
HHH
Motif
Other DBs
NCBI-ProteinID:
UOX53581
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All DBs
Position
2825612..2827486
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AA seq
624 aa
AA seq
DB search
MSEAIKEAEKILKQYYGYDHFREGQIPVIKAVLGGRDVLGIMPTGAGKSVCYQVPALMME
GITIVISPLISLMKDQVGTLNQMGVHAAFLNSSLTAGQYYKALQLAKQGRYKIIYVAPER
LETESFLDFALSEHVKISFVAVDEAHCVSQWGQDFRPGYLKILDFLDRLPYRPVVGAYTA
TATAEVREDILDILKLQNPYVETTGFDRGNLFFAVKKPVDKYKELVSYLKEKGCDTSGDS
GIIYCLTRKSVEQVCYDLRNEGFSVTRYHAGLSDEERKENQENFIYGKRQIMVATNAFGM
GIDKPDVRFVIHYNMPKNMESYYQEAGRAGRDGEPSECILYYEPRDVRTNRLFIENGEEN
SELDEETRKIVKERDLERLKQMTFYCFTSECLRQYILNYFGEKSSSYCGNCLNCQTQFEE
VDITLEANTILRCLDVLDWNYGAATVIDIVHGGKSQKILGKNLDKNPEYAVLSERTVPRL
RQILRELQFREYVEEKGEQYPVICLTPEGKAFMETEELLVMKLPKEETEKKSESKEKKNR
RKKGAVAAELSEKDAELFESLRELRREIASEEKVPPYMVFADKTLAGMCVMRPATRDEML
EVSGVGEHKLEKYGDRFLEILRKG
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggcaatcaaagaagcggaaaagatactgaaacaatactacggctatgaccat
ttccgggagggacagatcccggtgatcaaagcggtactgggaggcagggatgtgcttgga
atcatgccgaccggagcaggaaagtcggtgtgttatcaggtgcctgcacttatgatggaa
ggaattacaatcgtgatctcgccgctgatctcgcttatgaaagatcaggtgggaacgctg
aaccagatgggagtccatgccgctttcttaaatagttctctgactgcaggacagtattac
aaagcactgcagcttgcaaagcagggaaggtacaagattatatatgtggcaccggagcgt
ctggagacagaaagttttctggattttgcactgtctgagcatgtaaagatatccttcgtt
gcagtagatgaggcacactgcgtatcacagtggggacaggatttccgcccagggtatttg
aaaatcctggattttctggatcgtctgccgtaccgtccggtggtcggtgcatacacggcg
acggcaacagcagaggtaagagaagacatccttgatatcttaaagcttcagaacccgtat
gtggaaacaaccgggttcgatcgtggaaatcttttcttcgcagtgaagaaacctgtggat
aagtataaggaattagtcagttatctgaaggaaaaaggatgtgatacatccggtgacagt
ggaatcatttactgtctgacaagaaaaagcgtggagcaggtctgttacgatctgagaaat
gaagggttctccgtaaccagatatcatgccggattatcggatgaagaacggaaggaaaat
caggagaacttcatatatggaaagcgtcagatcatggtggcgacgaatgcattcggaatg
ggaatcgataagccggatgtacgctttgtcattcattataatatgccgaaaaatatggaa
agctattatcaggaggccggacgtgcaggaagagacggggagccgtcagaatgtatcctg
tattacgagccgagagacgtaagaacgaaccgtctctttattgaaaatggagaagagaac
agcgaactggatgaagagacgcgcaaaattgtgaaagaacgggatctggaacggttgaaa
cagatgacattttactgctttacgtcggaatgcttaagacaatatatcttgaattatttt
ggagaaaagagcagttcttattgcggaaactgtctgaactgccagacacagtttgaagag
gtagatatcacattggaggcgaatacaatcctgcggtgtctggatgtactggactggaat
tacggggcagcgacggtgatcgatattgtgcacggcggaaagagtcagaagatcctgggc
aagaatctggataagaatccagaatatgcagtgttaagtgagcggacggttccgagatta
cgacagatattaagggaattacagttccgtgaatatgtggaagaaaagggcgaacaatat
ccggtgatctgtctgactccggaagggaaagcttttatggagacggaagaactgctggtc
atgaagcttccgaaagaagagacagaaaagaaatctgaatcaaaagagaaaaagaacaga
cgcaaaaaaggcgcagtggcagcggaactttcagaaaaagatgcagaattattcgaaagc
ttacgggaactcagacgtgagatcgcatcggaagaaaaggtaccgccgtatatggtattt
gcagataagacacttgccggtatgtgtgtaatgcgtccggcgacacgggatgagatgttg
gaagtatcgggtgtcggagagcataaactggaaaagtatggagatagattcttagaaatt
ctcagaaagggataa
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