Diaphorobacter limosus: P4826_03020
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Entry
P4826_03020 CDS
T10112
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
dls Diaphorobacter limosus
Pathway
dls03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dls00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P4826_03020 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dls03021
]
P4826_03020 (rho)
03019 Messenger RNA biogenesis [BR:
dls03019
]
P4826_03020 (rho)
Transcription machinery [BR:
dls03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
P4826_03020 (rho)
Messenger RNA biogenesis [BR:
dls03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
P4826_03020 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_25
S1CSD-TOTE-2
Spore_III_AA
AAA
ResIII
Motif
Other DBs
NCBI-ProteinID:
WOO33087
UniProt:
A0ABZ0J498
LinkDB
All DBs
Position
complement(617548..618810)
Genome browser
AA seq
420 aa
AA seq
DB search
MHLNELKALHVSEVLKQAEALEIENGGRMRKQELMFAIIKKRAKAGEQVFADGVLEILPD
GFGFLRSPDSSYTASTDDIYISPSQVRRFNLHTGDMIEGEVRIPKDGERYFALTKLDTVN
GGPPEQNKHKVMFENLTPLFPKEQMRLERDIKGEENITGRIIDIIAPIGRGQRALIVAPP
KSGKTVMMQHIAHAITANNPDVHLMVLLVDERPEEVTEMQRSVKGEIIASTFDEPAARHV
HVAEMVIERAKRLVELKKDVVILLDSITRLARAYNNVVPSSGKVLSGGVDSNALQRPKRF
FGAARKVEEGGSLTIIATALVDTGSRMDEVIFEEFKGTGNCEIHLSRRLYEKRVFPAIEL
SKSGTRREELLLAPEILQKTRILRQFMYNMDEIESMELMIKKMRETKSNVDFFEAMRRGG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcaccttaacgaactcaaggcactgcacgtgtccgaggtcctcaagcaggccgaagcc
ctggaaatcgaaaacggcggccgcatgcgcaagcaggagctgatgttcgccatcatcaag
aagcgcgccaaggcgggcgagcaggtgtttgccgacggtgtgctggagatcctgcccgac
ggtttcggctttctgcgcagccccgacagcagctacacggccagtaccgacgacatctac
atcagccccagccaggtgcgccgcttcaacctgcacaccggcgacatgatcgagggcgag
gtgcgcatccccaaggatggcgagcgctactttgccttgaccaagctcgacaccgtcaac
ggcgggccacccgaacagaataagcacaaggtgatgttcgagaacctgacgccgctgttc
cccaaggagcagatgcgcctggagcgcgacatcaagggcgaggagaacatcaccggccgc
atcatcgacatcatcgcccccattggccgcggccagcgcgcgctgatcgtcgcgcccccg
aagagcggcaagacggtgatgatgcagcacatcgcccacgccatcaccgccaacaacccc
gatgtgcacctgatggtgctgctggtggacgagcgcccggaagaagtgaccgagatgcag
cgctcggtcaagggcgagatcattgcctcgaccttcgacgagccggccgcgcgccacgtg
catgtggccgagatggtgatcgagcgcgccaagcgcctggtggagctgaaaaaagacgtg
gtcatcctgctggactccatcacccgcctggcacgcgcctacaacaacgtcgtgcccagc
tcgggcaaggtgctgtcgggcggtgtcgattccaacgcactgcagcgccccaagcgcttc
ttcggcgcggcgcgcaaggtcgaggaaggcggttcgctgaccatcatcgccaccgcgctg
gtcgataccggcagccgcatggacgaggtgatctttgaagaattcaagggcacgggcaac
tgcgaaatccacctgagccgccgtctgtacgaaaagcgcgtgttcccggcgatcgaactg
tccaagagcggcacgcgccgcgaggaactgctgctggcgcccgagatcctgcaaaaaacc
cgcatcctgcgccagttcatgtacaacatggacgagatcgagtccatggagctgatgatc
aagaagatgcgcgagaccaagagcaacgtcgacttcttcgaggccatgcgccgcggcggt
tga
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