Diaphorobacter limosus: P4826_05570
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Entry
P4826_05570 CDS
T10112
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
dls Diaphorobacter limosus
Pathway
dls00541
Biosynthesis of various nucleotide sugars
dls01100
Metabolic pathways
dls01250
Biosynthesis of nucleotide sugars
Module
dls_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
dls00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
P4826_05570 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
dls01005
]
P4826_05570 (kdsB)
Enzymes [BR:
dls01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
P4826_05570 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
dls01005
]
Lipid A
P4826_05570 (kdsB)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
Motif
Other DBs
NCBI-ProteinID:
WOO33546
UniProt:
A0ABZ0J7D2
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All DBs
Position
1143844..1144632
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AA seq
262 aa
AA seq
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MSTAAAPFTVLIPARLASTRLPNKPLADIAGLPMVVHVARRAAQSAALRCVVAADDGRIV
DACRLHGVEALLTRADHASGSDRLAEACEQLSLAGDDIVVNVQGDEPLIDPQLIDAVAAL
LHQRADASMGTAAHAIASAADFANPNVVKVVLDAHGLAHYFSRAPIPHARDHAAGSCWWQ
PGQGGPAGFAPLRHIGIYSYRAGFLRGFPQLPPAPTEQLEALEQLRALWHGHRIAVHVTA
SEPGAGVDTPTDLERVRALLAG
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccgccgccgcgcccttcacggtgctgatcccggcgcgcctggcctccacgcgc
ctgccgaacaagccgctggccgacatcgccggcctgcccatggtcgtgcatgtggcgcgc
cgcgccgcgcaaagcgccgccctgcgttgcgtggtggcggccgacgatggtcgcatcgtc
gatgcttgccgcctgcacggcgtcgaggccctgctgacccgcgccgaccacgccagtggc
agcgaccgcctggccgaagcctgcgagcaactgagcctggccggagacgacatcgtcgtc
aacgtgcagggcgacgagccactgatcgacccgcagctcatcgacgccgtggccgcgctg
ctgcaccagcgcgccgacgccagcatgggcacggccgcccatgccatcgccagcgccgcc
gactttgccaaccccaacgtggtcaaggtggtgctggacgcacatggcctggcgcactac
ttcagccgtgcgccgatcccccatgcgcgcgaccacgccgccgggagctgctggtggcag
cccggccagggcggcccggccggctttgcgccgctgcgccacatcggcatctacagctac
cgcgccggttttctgcgcggctttccgcagctgccacccgcacccaccgagcagctggag
gcgctggagcagctgcgcgcgctctggcacggccaccgcatcgccgtgcatgtgacggcc
agcgagccgggcgccggcgtggacacccccaccgacctggaacgcgtgcgcgccctgctg
gcggggtag
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