Diaphorobacter limosus: P4826_05925
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Entry
P4826_05925 CDS
T10112
Symbol
nirJ
Name
(GenBank) heme d1 biosynthesis radical SAM protein NirJ
KO
K24868
heme d1 biosynthesis protein
Organism
dls Diaphorobacter limosus
Brite
KEGG Orthology (KO) [BR:
dls00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99987 Cofactor metabolism
P4826_05925 (nirJ)
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
WOO33611
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Position
1220523..1221737
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AA seq
404 aa
AA seq
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MFRISQYMRELAQAQSTGVYPVVKDRKARGPVVIWNLIRRCNLTCKHCYALSADHDYAGE
LLLPEVFTVMDDLKAFGVPALILSGGEPLLRPDIFEISARAREMGFYTGLSTNGTLIDAL
MAQRIAEAGFDYVGISLDGLKATHDKFRRLEGAFDRSLAAIGHLDKVGVKVGLRYTMTAM
NGHDLPALLDLMQEVGAHKFYFSHLNYAGRGNIHRDKDAHHQATRAAMDMLFDRAWAAAQ
AGSMDDYVSGNNDADGPYLLQWVRQHLPQWEDALRARLVAWGGNASGQQIANIDNLGHVH
PDTMWWHHDLGCVRDRPFSQIWNDVSDPLMAGLKQRPRPVQGRCGGCQHLAICNGNTRVR
AQQLTGNFWFEDPGCYLSDAEVGAASTPFEPAPAKRRRIEVVTA
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgcatcagccaatacatgcgcgaactggcgcaagcgcaaagcaccggcgtctac
ccggtagtcaaagaccgcaaggcgcgcggcccggtcgtgatctggaacctgatccgccgc
tgcaacctgacctgcaagcactgctatgccctgtcggccgaccacgattacgccggcgag
ctgctgctgcccgaggtgttcacggtgatggacgacctcaaggccttcggcgtgccggcg
ctgatcctctcgggcggcgagccactgttgcgccccgacatcttcgagatctcggcgcgc
gcgcgcgagatgggcttctacaccggcctgtcgaccaacggcacgctgatcgacgcgctc
atggcgcagcgcattgctgaggccggttttgactatgtcggcatcagcctcgatggcctg
aaggccacgcacgacaagttcaggcgcctggagggcgcgtttgaccgcagtcttgccgcc
atcggccacctggacaaggtgggcgtcaaggtcggcctgcgctacaccatgaccgccatg
aacggccacgacctgccggcgctgctggatttgatgcaggaggtgggcgcgcacaagttc
tacttctcgcacctgaactacgccgggcgcggcaacatccaccgcgataaagacgcgcac
caccaggccacgcgcgcagccatggacatgctgtttgaccgcgcctgggccgccgcgcag
gccggcagcatggatgactacgtgagcggcaacaacgacgccgacggcccctacctgctg
caatgggtgcgccagcacctgccgcagtgggaggacgccttgcgcgcgcgcctggtcgcc
tggggcggcaacgccagcggccagcagatcgccaacatcgacaacctcggccatgtccac
cccgacaccatgtggtggcaccacgacctgggctgcgtgcgcgatcgccccttctcgcag
atctggaacgacgtgagcgacccgctgatggccggcctgaaacagcgcccgcgcccggtc
cagggccgctgcggcggctgccagcacctggccatctgcaacggcaacacccgcgtgcgc
gcgcagcagctcaccggcaacttctggtttgaagacccgggctgctacctgagcgacgcc
gaggtgggggccgcgtccactccgttcgagccggcaccggcgaaacgccggcgcattgag
gtggtgacggcgtaa
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