Diaphorobacter limosus: P4826_06160
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Entry
P4826_06160 CDS
T10112
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dls Diaphorobacter limosus
Pathway
dls03030
DNA replication
dls03430
Mismatch repair
dls03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
P4826_06160 (dnaE)
03430 Mismatch repair
P4826_06160 (dnaE)
03440 Homologous recombination
P4826_06160 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dls03032
]
P4826_06160 (dnaE)
03400 DNA repair and recombination proteins [BR:
dls03400
]
P4826_06160 (dnaE)
Enzymes [BR:
dls01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
P4826_06160 (dnaE)
DNA replication proteins [BR:
dls03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
P4826_06160 (dnaE)
DNA repair and recombination proteins [BR:
dls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
P4826_06160 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WOO33653
UniProt:
A0ABZ0J6Z6
LinkDB
All DBs
Position
complement(1269089..1272637)
Genome browser
AA seq
1182 aa
AA seq
DB search
MFVHLRLHTEFSVVDGTTRIDEVVKAAAKDGQPALAITDLNNLFGAIKFYKEGRGKGVKP
ILGAEVYLEGEAGAPPARLLLLVQNRQGYLNLSELLARAWTRGVVKNLPLCTWDWLQELH
AGLIALAGAQAGPVGQALMRGDEAGAAALALRLAGVFPHRFYIELQRAGRADDEAHVTAA
VQLAARLQLPVVATHPVQFGQADGYEAHEARVCIAEGEILASQRRVRRFTREQYFKSSAE
MQALFADLPSAIANTLEIAKRCNLTLVLGKPQLPDFPTPNGMPIDEYFRYASFEGLKERL
LHLFPQEAEREKQRPRYEERLEFELGTILKMGFPGYFLIVGDFIQWAKANGCPVGPGRGS
GAGSLVAYALKITDLDPLQYNLLFERFLNPERVSMPDFDIDFCQSNRDRVIDYVKDKYGK
NAVSQIATFGTMAAKAAIRDVGRVMDMSYTFCDGISKLVPGKPGQTYTLAYPPEPKKEGD
KNNYALELEPQLYERVRNEEDVRTIIEMAQQLEGMTRNIGMHAGGVLIAPGKLTDFCPLY
QQPGSESAVSQYDKDDVEAIGLVKFDFLGLATLTILEIAREFIQQRHKGQENFAFEDIPL
DDGPTYRLFSDGKTEAVFQFESRGMQGMLKEARPSRLEDLIALNALYRPGPMDLIPSFVN
RKHGKEVVEYPHPLVEPVLAETYGIMVYQEQVMQTAQVLGGYSLGGADMLRRAMGKKKPE
EMAEHRIIFRKGAAEKGISQDKADEVFDLMEKFAGYGFNKSHAAAYSLLAYHTGWLKVHF
TAEFFCANMTVEMDDTDKLKVLYEDAVKHFGISFEPPDINRGRYRFEPVTDKVIRYGLGA
VKGTGQQAIEAIIAAREGRGEGPRGGDHGPFKSLFDFCVRVDRARINKRTVEALIKAGAF
DALQLNRAALVASIDRAFDFAAAQLANANQGGLFDMMGEDAVGSSTQEPDLADATPWGIK
ERLMQEKTAVGFYLSGHLFDEVQQEVRRFVRTPIAELGDSRETQVLAGIISDSRQINGQR
GKLALFKIDDKSAVIEASADEAVIAASGAMLKDDEFVVLSGRLQLDHFSGGLRLKVQQVW
DLGAARARFGRYLLVGANGGTRPDVAALVREFPPRREETDQGEMLVHGLRVRMGVHCQGV
GGAADAELQLGEASRFFPSDAALAAWGAQAGSSNISVVYESA
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcacctgcgcctgcataccgaattttccgtcgtggacggaaccacccgcatc
gacgaggtcgtcaaggccgctgccaaggatgggcagcccgccctggcgattaccgacctg
aacaacctctttggcgccatcaagttctacaaggaagggcgtggcaagggggtcaagccc
attctgggcgccgaggtctacttggaaggcgaggccggcgcgccgcccgcgcgcctgctg
ctgctggtgcagaaccgccagggctacctgaacctgtccgagctgctggcacgcgcctgg
acgcggggtgtcgtgaagaacctgccgctgtgtacctgggactggctgcaggagctccat
gccggcctgatcgcgctggccggcgcccaggccggccccgtgggccaggcgctgatgcgt
ggcgacgaagccggcgcggcggcgctggccctgcgcctggcgggtgtttttccacatcgt
ttttacatcgagttgcagcgcgccggccgtgccgatgacgaggcccatgtcaccgccgcc
gtgcagctggcggcgcggctgcagctgccggtggtggccacgcacccagtgcagtttggc
caggccgatggttacgaggcgcatgaggcgcgcgtgtgcatcgccgagggcgagatcctg
gccagccagcggcgcgtgcgccgtttcacgcgcgagcagtacttcaagagcagcgccgag
atgcaggcgctgtttgccgacctgccctcggccattgccaacacgctggagatcgccaag
cgctgcaacctgacgctggtgctgggcaagccgcagctgcccgactttcccactcccaat
ggcatgccgatcgatgagtatttccgctacgcctcgttcgagggcctcaaggagcgcctg
ctgcaccttttcccccaggaggccgagcgcgaaaagcagcgtccgcgctacgaggaacgg
ctggagttcgagctgggcaccattctgaagatgggctttccgggctacttcctcatcgtg
ggcgacttcatccagtgggccaaggccaacggttgcccggtgggccccggccgtggctcg
ggcgcgggctcgctggtggcctatgcgctgaagatcacggatctggacccgctgcagtac
aacctgctgttcgagcggtttttgaaccccgagcgggtgtccatgcccgacttcgacatc
gacttctgccagtccaaccgcgaccgggtgatcgactatgtgaaggacaagtacggcaag
aatgccgtgagccagatcgccaccttcggcaccatggccgccaaggcggccatccgcgac
gtgggccgcgtcatggacatgagctacaccttctgcgacggcatttcaaaattggtgccc
ggcaagcccggtcagacctacaccctggcctacccgcccgagcccaagaaggaaggcgac
aagaacaactacgcgctggagctcgaaccccagctgtatgagcgcgtgcgcaacgaggag
gatgtgcgcaccatcatcgagatggcgcagcagctcgagggcatgacgcgcaacatcggc
atgcacgccggcggcgtgctgattgcaccgggcaagctgaccgatttttgcccgctctac
cagcagccaggcagcgagtcggccgtgagccagtacgacaaggacgatgtcgaggccata
ggcctggtcaagttcgactttctgggcctggcgacgctcaccatcctggagattgcacgc
gaattcatacagcagcgccacaaaggccaggagaactttgccttcgaggacatcccgctg
gatgacgggcccacctaccggctgttctccgacggcaagaccgaggcggtgttccagttt
gaaagccgcggcatgcagggcatgctgaaagaggcccgccccagccgcctggaagacctg
attgccctcaacgccctgtaccgcccgggccccatggacctgattcccagcttcgtgaac
cgcaagcacggcaaggaggtggtggagtacccgcacccgctggtcgagcccgtgctggcc
gagacctacggcatcatggtctaccaggagcaggtgatgcagaccgcccaggtcctgggc
ggctacagcctgggcggcgccgacatgttgcgccgcgccatgggcaagaaaaagcccgag
gaaatggccgagcaccgcatcatcttccgcaagggcgcggcagagaagggcatcagccag
gacaaggccgacgaggtcttcgacctgatggagaagtttgccggctacggcttcaacaag
tcgcatgccgccgcctattcgctgctggcctaccacacgggctggctcaaggtgcacttc
acggccgagttcttctgcgccaacatgacggtggaaatggacgacaccgacaagctcaag
gtgctgtacgaggatgcggtcaagcatttcggcatcagcttcgagccgccggacatcaac
cgcggcaggtaccgcttcgagcccgtgaccgacaaggtcatccgctacggcctgggcgcc
gtcaagggcacgggccagcaggccatagaggccatcattgccgcgcgtgagggccgtggc
gaggggccgcgcggcggcgaccacgggccgttcaagagcctgttcgacttctgcgtgcgc
gtggacagggcgcgcatcaacaagcgcacggtggaggcgctgatcaaggccggcgccttc
gacgcgctgcagctcaaccgcgcggcgctcgtggcgtccatagaccgcgcatttgacttt
gccgcggcgcaactggccaacgccaaccagggcgggctgttcgacatgatgggcgaggat
gccgtgggctccagcacccaggagcccgatctggccgacgccacgccctggggcatcaag
gagcgcctgatgcaggaaaagacggcggtcggcttctacctctcgggccatctgttcgac
gaggtgcagcaggaggtgcggcgctttgtgcgcacgccgattgccgagctgggcgacagc
cgcgagacccaggtgctggccggcatcatcagcgactcgcgccagatcaatggccagcgc
ggcaagctggcgctgttcaagattgatgacaaatcggcggtgatcgaggcctcggcggac
gaggcagtgatcgccgccagcggcgccatgctcaaggacgacgagtttgtggtcttgagc
gggcggctgcagctcgatcacttcagcggcgggctgcgcctgaaggtgcagcaggtctgg
gacctgggcgcggcgcgcgcacgctttggccgctacctgctggtgggcgccaatggcggc
accaggcccgacgtggcggccctggtgcgtgaatttcccccgcgacgcgaggaaaccgac
caaggcgagatgctggtgcacggcctgcgcgtgcgcatgggcgtgcattgccagggggtg
ggtggcgccgcggacgccgagttgcaactgggcgaggccagccgcttctttcccagcgac
gcggctctggccgcctggggcgcgcaggccggtagcagcaatatcagcgtggtgtacgag
agcgcttga
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integrated database retrieval system
