Diaphorobacter limosus: P4826_06430
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Entry
P4826_06430 CDS
T10112
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dls Diaphorobacter limosus
Brite
KEGG Orthology (KO) [BR:
dls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dls03016
]
P4826_06430 (truB)
Enzymes [BR:
dls01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
P4826_06430 (truB)
Transfer RNA biogenesis [BR:
dls03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
P4826_06430 (truB)
Prokaryotic type
P4826_06430 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
WOO33702
UniProt:
A0ABZ0J619
LinkDB
All DBs
Position
complement(1325590..1326561)
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AA seq
323 aa
AA seq
DB search
MIERAPRIRVQRRPVHGVLLLDKPLGLSSNNALQKVKWLLRAEKAGHTGTLDPLATGVLP
LCFGAATKFSALQLDAPKTYEAVALLGITTSTGDAEGEVLQRRDVDPGQLTPERLAQVQA
QFTGAIRQVPPMHSALKKDGKALYEYARAGVEVERAPRDVTIHALELAVSQVGKAQTAIK
IIVTCSKGTYIRTLGEDIGQALGCGAHLTFLRRIDTGGLGVQRCVTLAALEAMTEDERLA
CVQSVDTLLAQHERVTLDESEAGRFLSGLRRRGPWADAPAVAVYGTRPRALLGVAHVAQG
ELIPDRLLSPLEIQQILESAPRA
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgattgagcgcgctccccgcatccgggtgcagcggcgcccggtgcacggagtgctgctg
ctcgacaaacccctgggcctgtccagcaacaacgccttgcaaaaggtgaagtggttgctg
cgcgccgagaaggccggccacaccggcacgctcgacccgctggcgaccggcgtgctgccg
ctgtgctttggtgcggccaccaagttcagcgcgctgcagctggatgcacccaagacctac
gaggcagtcgccctgttgggcatcacgaccagcaccggcgatgccgaaggcgaggtgctg
cagcggcgcgatgtagaccctggccagctcacgcccgagcgcctggcgcaggtgcaggcg
cagttcaccggcgccatacgccaggtgcctcccatgcacagtgcgctgaagaaggacggc
aaggcgttgtacgaatacgcacgtgccggcgtggaggtcgagcgggcgccgcgcgatgtc
accattcatgcattagaactggctgtatcgcaggtgggtaaagcgcaaacagctataaaa
ataatagtaacctgcagcaaaggcacctacatccgcaccctgggcgaggacataggtcag
gccctgggctgcggtgcgcacctgacgtttctgcgccgcattgacactggcggcctgggc
gtgcagcgctgcgtgacgctggccgcactcgaggccatgaccgaggacgagcgcctggcc
tgtgtgcagagcgtggacacgctgctcgcgcagcacgaaagggtcacgctggatgagagc
gaggccgggcgctttctgtccggcctgcgccggcgtggcccctgggccgatgcgccggcc
gtggccgtgtatggcacgcgccccagggcgctgctgggcgtggctcatgtcgcgcagggt
gagctgatcccggacaggctgctgagccccctggaaattcaacagatattggaaagcgcg
ccgcgcgcatag
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