Diaphorobacter limosus: P4826_08500
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Entry
P4826_08500 CDS
T10112
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
dls Diaphorobacter limosus
Pathway
dls00300
Lysine biosynthesis
dls00470
D-Amino acid metabolism
dls01100
Metabolic pathways
dls01110
Biosynthesis of secondary metabolites
dls01120
Microbial metabolism in diverse environments
dls01230
Biosynthesis of amino acids
Module
dls_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
dls_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dls00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
P4826_08500 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
P4826_08500 (lysA)
Enzymes [BR:
dls01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
P4826_08500 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WOO34081
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All DBs
Position
1759040..1760332
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AA seq
430 aa
AA seq
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MIPSPLPGQPQLHYRDASLYLEDRRLSDLAREHGTPLYVYSQAAMLQALAAYQRGFAGRK
VQICYAMKANSSLAVLQLFARHGCGFDIVSGGELERVMAAGGDPAKVIFSGVGKTRAEMR
QALEAGIGCFNVESEAELGVLSEVAQAMGLRAPVSIRVNPNVDAKTHPYISTGLKGNKFG
IAHERTVATYQRAAQLPGLRVVGIDCHIGSQITEETPYLDAMDRMLDLVQAVEAAGIAIQ
HIDFGGGLGINYNGDQPPAADVLWAKLLAKLDARGYGQRQLMIEPGRSLVGNAGVCLTEV
LYLKPGEQKNFCIVDAAMNDLPRPAMYQAYHAIVPLEAAGAQQEPQVYDVVGPICESGDW
LGRERSLAVAAGDLLAVLSTGAYCSSMGSTYNTRPRPAELLVDGAAAHLIRARESVSDIY
RSERLVPTKA
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgatccccagccccctgcccggccagccccagctgcattaccgcgacgcatccctgtac
ctcgaagaccggcgcctgtcggatctggcgcgcgagcatggcacgccgctgtacgtctat
tcgcaggccgccatgctgcaggccctggccgcctaccagcgcggctttgccgggcgcaag
gtgcagatctgctacgccatgaaggccaattcatcactggccgtgctgcagctgtttgcg
cgccatggctgcggcttcgacatcgtctcgggtggcgagcttgaacgcgtgatggccgcc
ggcggcgacccggccaaggtcatcttctcgggcgtgggcaagacccgcgccgagatgcgc
caggcgcttgaggccggcattggctgcttcaacgtggagagcgaggccgagctgggggtg
ctgagcgaagtggcccaggccatgggcctgcgcgcaccggtcagcatccgcgtcaacccg
aacgtggacgccaagacccacccctacatctccacgggcctgaagggcaacaagttcggc
atcgcccacgagcgcaccgtggccacctaccagcgcgccgcgcagttgcccggcctgcgc
gtggtcggcatcgactgccacatcggctcgcagatcaccgaagagacgccctacctggac
gccatggatcgcatgctggacctggtgcaggcggtggaggcggcgggcatcgccatccag
cacatcgacttcggcggcggcctgggcatcaactacaacggcgaccagccgcccgcggcc
gatgtcctgtgggccaagctgctggccaagctggatgcgcgcggctatggccagcgccag
ctgatgatcgagccgggccgttccctggtgggcaatgccggcgtgtgcctgaccgaggtg
ctgtacctcaagcccggcgagcagaagaatttctgcatcgtcgacgccgccatgaacgac
ctgccgcgcccggcgatgtaccaggcctaccacgccatcgtgccgctggaggccgccggc
gcccagcaagagccgcaggtctacgacgtggtcggaccgatctgcgagagcggcgactgg
cttgggcgcgagcgcagcctggccgtggccgcaggcgacctgctggccgtgctctccacc
ggggcctattgcagctccatgggcagcacctacaacacccggccgcgcccggccgagctg
ctggtcgatggcgcggcggcgcacctgatccgcgcgcgcgagagtgtcagcgacatctac
cgcagcgagaggctggtgcccaccaaggcctga
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