KEGG   Diaphorobacter limosus: P4826_08500
Entry
P4826_08500       CDS       T10112                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
dls  Diaphorobacter limosus
Pathway
dls00300  Lysine biosynthesis
dls00470  D-Amino acid metabolism
dls01100  Metabolic pathways
dls01110  Biosynthesis of secondary metabolites
dls01120  Microbial metabolism in diverse environments
dls01230  Biosynthesis of amino acids
Module
dls_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
dls_M00526  Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:dls00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    P4826_08500 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    P4826_08500 (lysA)
Enzymes [BR:dls01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     P4826_08500 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: WOO34081
LinkDB
Position
1759040..1760332
AA seq 430 aa
MIPSPLPGQPQLHYRDASLYLEDRRLSDLAREHGTPLYVYSQAAMLQALAAYQRGFAGRK
VQICYAMKANSSLAVLQLFARHGCGFDIVSGGELERVMAAGGDPAKVIFSGVGKTRAEMR
QALEAGIGCFNVESEAELGVLSEVAQAMGLRAPVSIRVNPNVDAKTHPYISTGLKGNKFG
IAHERTVATYQRAAQLPGLRVVGIDCHIGSQITEETPYLDAMDRMLDLVQAVEAAGIAIQ
HIDFGGGLGINYNGDQPPAADVLWAKLLAKLDARGYGQRQLMIEPGRSLVGNAGVCLTEV
LYLKPGEQKNFCIVDAAMNDLPRPAMYQAYHAIVPLEAAGAQQEPQVYDVVGPICESGDW
LGRERSLAVAAGDLLAVLSTGAYCSSMGSTYNTRPRPAELLVDGAAAHLIRARESVSDIY
RSERLVPTKA
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgatccccagccccctgcccggccagccccagctgcattaccgcgacgcatccctgtac
ctcgaagaccggcgcctgtcggatctggcgcgcgagcatggcacgccgctgtacgtctat
tcgcaggccgccatgctgcaggccctggccgcctaccagcgcggctttgccgggcgcaag
gtgcagatctgctacgccatgaaggccaattcatcactggccgtgctgcagctgtttgcg
cgccatggctgcggcttcgacatcgtctcgggtggcgagcttgaacgcgtgatggccgcc
ggcggcgacccggccaaggtcatcttctcgggcgtgggcaagacccgcgccgagatgcgc
caggcgcttgaggccggcattggctgcttcaacgtggagagcgaggccgagctgggggtg
ctgagcgaagtggcccaggccatgggcctgcgcgcaccggtcagcatccgcgtcaacccg
aacgtggacgccaagacccacccctacatctccacgggcctgaagggcaacaagttcggc
atcgcccacgagcgcaccgtggccacctaccagcgcgccgcgcagttgcccggcctgcgc
gtggtcggcatcgactgccacatcggctcgcagatcaccgaagagacgccctacctggac
gccatggatcgcatgctggacctggtgcaggcggtggaggcggcgggcatcgccatccag
cacatcgacttcggcggcggcctgggcatcaactacaacggcgaccagccgcccgcggcc
gatgtcctgtgggccaagctgctggccaagctggatgcgcgcggctatggccagcgccag
ctgatgatcgagccgggccgttccctggtgggcaatgccggcgtgtgcctgaccgaggtg
ctgtacctcaagcccggcgagcagaagaatttctgcatcgtcgacgccgccatgaacgac
ctgccgcgcccggcgatgtaccaggcctaccacgccatcgtgccgctggaggccgccggc
gcccagcaagagccgcaggtctacgacgtggtcggaccgatctgcgagagcggcgactgg
cttgggcgcgagcgcagcctggccgtggccgcaggcgacctgctggccgtgctctccacc
ggggcctattgcagctccatgggcagcacctacaacacccggccgcgcccggccgagctg
ctggtcgatggcgcggcggcgcacctgatccgcgcgcgcgagagtgtcagcgacatctac
cgcagcgagaggctggtgcccaccaaggcctga

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