Diaphorobacter limosus: P4826_11080
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Entry
P4826_11080 CDS
T10112
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
dls Diaphorobacter limosus
Pathway
dls03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dls00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
P4826_11080 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dls03021
]
P4826_11080 (rpoC)
03400 DNA repair and recombination proteins [BR:
dls03400
]
P4826_11080 (rpoC)
Enzymes [BR:
dls01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
P4826_11080 (rpoC)
Transcription machinery [BR:
dls03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
P4826_11080 (rpoC)
DNA repair and recombination proteins [BR:
dls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
P4826_11080 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
WOO30965
UniProt:
A0ABZ0J078
LinkDB
All DBs
Position
complement(2292423..2296652)
Genome browser
AA seq
1409 aa
AA seq
DB search
MKSLLDLFKQFTPDEHFDAIKIGMASPEKIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIDLAAPCAHIWFLKSL
PSRLGLVLDMTLRDIERVLYFEAYVVTDPGMTPLKKFSIMSEDDYDAKRKEYGDEFIAKM
GAEGIKELLEGIDLEIEIERLRGDLTGSEVKVKKNAKRLKVLEAFKKSGIKPEWMVLEVL
PVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNSRLRRLLELKAPEIIARNEKRMLQEA
VDSLLDNGRRGKAMTGANKRALKSLADMIKGKSGRFRQNLLGKRVDYSGRSVITVGPTLK
LHQCGLPKLMALELFKPFIFSRLEAMGIATTIKAAKKEVEAGTPVVWDILEEVIKEHPVM
LNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSVEAQLEART
LMLASNNVLFPASGEPSIVPSQDVVLGLYHATREKINGKGEGMVFTDIGEVQRALDAGEV
ELATKISVRLTEWNKNKDTGEFEPETKLVETTVGRALLSEILPKGLAFSNLNKALKKKEI
SKLINASFRKCGLKETVVFADKLLQNGFRLATRAGISICVDDMLVPAQKTDIIGRAEKEV
KEIEQQYVSGLVTAGERYNKVVDIWGKAGDDISKVMMDHLKKEKTIDRHGNEVDQESFNS
IYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARK
GLADTALKTANSGYLTRRLVDVTQDLVVTEDDCGTSNGSLMRAIVEGGEVIESLRERILG
RVVAEDVLHPETRDVLVAAGRMLDEDTIEEIETVGVDEVKVRTALTCATRYGLCAKCYGR
DLGRGGLINLGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSNGIIGFN
ATMRYVTNTKGELVVIARSGEIVIQDEHGRERERHKVPYGATLSVKADQQIKAGTILANW
DPLTRPIITEFAGTTKFENIEEGLTVAKQVDDVTGLSTLVVIDPKRRGSAKVVRPLVKLI
DANGQEVKIPGTDHAVAIGFQIGALIQVRDGQDVGPGEVLARIPVEGQKTRDITGGLPRV
AELFEARSPKDKGMLAEMTGTISFGKETKGKVRLQITDPDGHIWDELVPKEKNVLVHEGQ
VVNKGELIVDGSADPQDILRLLGIEELSRYIVDEVQDVYRLQGVKINDKHIEVIVRQMLR
RVVVENPGETSYIQGEQVERSEILNTNEQAQKDGKIPATYSNVLLGITKASLSTDSFISA
ASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGLAYHQARKVKDAMDEAERRA
IAEAEAAELASANAEGAAAELDGSADLAD
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgctactcgacctgttcaagcaattcacgccggatgagcactttgatgccatc
aagatcggcatggcctcgcccgagaagatccgttcctggtctttcggcgaggtgaagaag
cccgagaccatcaactaccgcaccttcaagcccgagcgcgacggcttgttctgcgccaag
atcttcgggcccatcaaggactatgagtgcctgtgcggcaagtacaagcgcctgaagcac
cgcggcgtgatctgcgaaaagtgcggcgttgaagtcacgcagaccaaggtgcgccgcgag
cgcatgggccatatcgacctggcggcgccctgcgcgcatatctggttcctgaagagcctg
ccgtcgcgtctgggcctggtgctggacatgacgctgcgcgacatcgagcgcgtgctgtac
ttcgaagcctatgtggtcaccgaccccggcatgacgccgctgaagaagttcagcatcatg
agcgaggacgactacgacgccaagcgcaaggaatatggcgacgagttcatcgccaagatg
ggcgccgagggcatcaaggagctgctcgagggtatcgacctcgagatcgagatcgagcgc
ctgcgcggcgacctgacgggctccgaggtcaaggtcaagaagaacgccaagcgcctgaag
gtgctggaagccttcaagaagtccggcatcaagcccgagtggatggtgctcgaggtgctg
cccgtgctgccgccggatctgcgtccgctggtgccgctggacggtggccgctttgccacc
tctgacctgaacgacctgtaccgccgcgtcatcaaccgcaactcgcgcctgcgccgcctg
ctggagctcaaggccccggagatcatcgcgcgcaacgaaaagcgcatgctgcaggaggcc
gtggacagcctgttggacaatggccgccgcggcaaggccatgacgggcgcgaacaagcgc
gccctcaagtccctggccgacatgatcaagggcaagagcggccgcttccgccagaacctc
ttgggcaagcgcgtggactactcgggccgttcggtgatcaccgtgggcccgacgctcaag
ctgcaccagtgcggcctgccgaagctgatggcgctggaactcttcaagcccttcatcttc
tcgcgcctggaggccatgggcatcgccacgaccatcaaggcggcgaagaaggaagtcgaa
gccggcacgccggtggtctgggacatcctggaagaggtcatcaaggaacacccggtcatg
ctcaaccgtgcgcccacgctgcaccgtctgggcatccaggccttcgagcccatcctgatc
gaaggcaaggccatccagctgcacccgctggtctgcgcggccttcaacgccgacttcgac
ggtgaccagatggccgtgcacgtgccgctgtccgtcgaggcgcagctggaggcgcgcacg
ctgatgctggcgtccaacaacgtgctgttcccggcctcgggcgagccctccatcgtgccc
tcgcaggacgtggtgctgggcctgtaccacgccacccgcgagaagatcaacggcaagggc
gagggcatggtcttcaccgacatcggtgaggtgcagcgcgcgctggacgcgggtgaggtt
gagctggccaccaagatcagcgtgcgcctgaccgagtggaacaagaacaaggacacgggc
gagttcgagcccgagaccaagttggtcgagaccaccgtcggccgtgccctgctgtcggag
atcctgcccaagggcctggcgttcagcaacctgaacaaggcgctgaagaagaaggaaatc
tccaagctcatcaacgccagcttccgcaagtgcggcctgaaggaaaccgtggtgtttgcc
gacaagctgctgcaaaacggcttccgcctggccacgcgcgccggtatttccatctgcgtg
gacgacatgctggtgccggcgcagaagaccgacatcatcggtcgcgccgagaaggaagtg
aaggagatcgagcagcagtatgtctccggcctggtcacggccggcgagcgctacaacaag
gtggtggacatctggggcaaggccggtgacgacatctccaaggtcatgatggaccacctg
aagaaggaaaagaccatcgaccgccacggcaacgaggtcgatcaagagtccttcaactcc
atctacatgatggccgactcgggcgcccgcggctctgctgcgcagatccgtcagctcgcc
ggcatgcgcggcctgatggccaagcccgatggctccatcatcgagacgcccatcacggcc
aacttccgcgaaggcctgaacgtgttgcagtacttcatctccacgcacggcgcccgcaag
ggtctggccgacacggcgctgaagacggccaactcgggttacctgacgcgccgtctggtg
gacgtgacgcaggacctggtggtgaccgaggacgactgcggcaccagcaatggctcgctg
atgcgcgccatcgtcgagggcggtgaagtcatcgaatcgctgcgcgaacgaatcctgggc
cgcgtcgtggccgaggacgtgctgcaccccgagacgcgcgacgtgctggtggccgctggc
cgcatgctggacgaagacacgatcgaggagatcgagaccgtcggcgtggatgaggtcaag
gtgcgcacggcgctgacctgcgcaacccgctacggcctgtgcgccaagtgctatggccgc
gacctgggccgcggtggcctgatcaacctgggcgaagccgtcggtgtgatcgccgcccag
tcgattggcgagcccggcacgcagctgaccatgcgtaccttccacatcggtggcgcggcc
tcgcgtgcggcggtggcctccagcgtcgaggccaagagcaacggcatcatcggcttcaac
gccacgatgcgctatgtgaccaacaccaagggcgagctggtggtgattgcccgttccggc
gagatcgtcatccaggacgagcatggccgcgagcgcgagcgccacaaggtgccctatggc
gcgacgctgtcggtcaaggccgaccagcaaatcaaggccggcaccatcctggccaactgg
gatccgctgacccgccccatcatcaccgagttcgccggcacgaccaagttcgagaacatc
gaagaaggcctgacggtggccaagcaggtggacgatgtcaccggtctgtccacgctggtg
gtgatcgaccccaagcgccgtggctccgccaaggtggtgcgcccgctggtcaagctgatc
gacgccaacggccaggaggtgaagatcccgggcaccgaccatgcggtggccatcggcttc
cagatcggcgcgctgatccaggtgcgcgacggccaggacgtgggcccaggcgaggtgctg
gcgcgcattccggtcgaaggccagaagacgcgcgacatcaccggcggtctgccgcgcgtg
gccgagctgttcgaggcccgcagccccaaggacaagggcatgctggccgagatgaccggc
accatctccttcggcaaggagaccaagggcaaggtgcgcctgcagatcaccgaccccgat
ggccatatctgggacgaactggtgcccaaggagaagaacgtgctggtgcacgagggccag
gtggtgaacaagggcgagctgatcgtcgatggttcggccgatccgcaggacatcctgcgc
ctgctgggcatcgaggagctctcgcgctacatcgttgatgaggtgcaggacgtgtaccgc
ctgcagggcgtgaagatcaacgacaagcacatcgaggtcatcgtgcgccagatgctgcgc
cgcgtcgtggtcgagaacccgggcgagaccagctacatccagggcgagcaggtcgagcgc
tcggagatcctcaacaccaacgagcaggcgcaaaaggacggcaagatcccggccacctac
tccaacgtgctgctgggcatcaccaaggcctcgctgtcgacagactccttcatctccgcg
gcctcgttccaggagacgacgcgcgtgctcaccgaggctgccatcatgggcaagcgcgac
gagctgcgcggcctgaaggaaaacgtcatcgtcggtcgcctgatccctgccggtaccggt
ctggcctaccaccaggcgcgcaaggtcaaggacgccatggatgaggccgagcgccgcgcc
atcgccgaggccgaagcggccgagctggccagcgccaatgccgaaggcgctgccgctgag
ctcgacggcagtgccgacctggcggactaa
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integrated database retrieval system
