Diaphorobacter limosus: P4826_12885
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Entry
P4826_12885 CDS
T10112
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dls Diaphorobacter limosus
Pathway
dls03030
DNA replication
dls03430
Mismatch repair
dls03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
P4826_12885
03430 Mismatch repair
P4826_12885
03440 Homologous recombination
P4826_12885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dls03032
]
P4826_12885
03400 DNA repair and recombination proteins [BR:
dls03400
]
P4826_12885
Enzymes [BR:
dls01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
P4826_12885
DNA replication proteins [BR:
dls03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
P4826_12885
DNA repair and recombination proteins [BR:
dls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
P4826_12885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
WOO31301
UniProt:
A0ABZ0J1R8
LinkDB
All DBs
Position
complement(2667393..2668022)
Genome browser
AA seq
209 aa
AA seq
DB search
MAAPIAVIDFETTGMAPAQGARATEVAIVLMEGEQVVDRFDSLMRTGVTIPPFIEQLTGI
SNAMLATAPPAEAVMREAARFVGSAPMVAHNAAFDSKFWQSELQHAGLAAPQPFACTVLL
SRRVFPDAPSHSLGRITDHLGLPRTGRAHRALADAEMAAALLARMQRELCQRFGVPWPDH
ALLMQLQRCARQSIGKLLDRLSTGAAHTS
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
gtggccgcacccatcgccgtcatcgacttcgagaccaccggcatggcgccggcccagggc
gcccgtgccaccgaggtggccatcgtgctcatggaaggcgagcaggtcgtcgatcgcttt
gacagcctgatgcgtaccggcgtaaccatcccgccgttcatcgaacagctcaccggcatc
agcaatgccatgttggccacggcgccgcccgccgaggcggtgatgcgcgaggcggcgcgc
tttgtaggcagcgcgcccatggtggcgcacaacgctgcgtttgacagcaagttctggcag
tccgaactgcagcacgccggcctggccgcgccccagccctttgcctgcaccgtactgctg
tcgcgccgcgtgtttcccgacgcgcccagccacagcctgggccgcatcaccgaccacctg
ggcctgccgcgcaccggccgcgcccaccgcgcgctggccgacgccgaaatggccgccgcc
ctgctggcacgcatgcagcgcgagctgtgccagcgctttggcgtcccctggcccgatcac
gccctgctgatgcagctgcagcgctgcgcgcgccagtccatcggcaagctgctggacagg
ctgtcaacgggcgcggctcacacctcatag
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