KEGG   Diaphorobacter limosus: P4826_12885
Entry
P4826_12885       CDS       T10112                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
dls  Diaphorobacter limosus
Pathway
dls03030  DNA replication
dls03430  Mismatch repair
dls03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dls00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    P4826_12885
   03430 Mismatch repair
    P4826_12885
   03440 Homologous recombination
    P4826_12885
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dls03032]
    P4826_12885
   03400 DNA repair and recombination proteins [BR:dls03400]
    P4826_12885
Enzymes [BR:dls01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     P4826_12885
DNA replication proteins [BR:dls03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     P4826_12885
DNA repair and recombination proteins [BR:dls03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     P4826_12885
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: WOO31301
UniProt: A0ABZ0J1R8
LinkDB
Position
complement(2667393..2668022)
AA seq 209 aa
MAAPIAVIDFETTGMAPAQGARATEVAIVLMEGEQVVDRFDSLMRTGVTIPPFIEQLTGI
SNAMLATAPPAEAVMREAARFVGSAPMVAHNAAFDSKFWQSELQHAGLAAPQPFACTVLL
SRRVFPDAPSHSLGRITDHLGLPRTGRAHRALADAEMAAALLARMQRELCQRFGVPWPDH
ALLMQLQRCARQSIGKLLDRLSTGAAHTS
NT seq 630 nt   +upstreamnt  +downstreamnt
gtggccgcacccatcgccgtcatcgacttcgagaccaccggcatggcgccggcccagggc
gcccgtgccaccgaggtggccatcgtgctcatggaaggcgagcaggtcgtcgatcgcttt
gacagcctgatgcgtaccggcgtaaccatcccgccgttcatcgaacagctcaccggcatc
agcaatgccatgttggccacggcgccgcccgccgaggcggtgatgcgcgaggcggcgcgc
tttgtaggcagcgcgcccatggtggcgcacaacgctgcgtttgacagcaagttctggcag
tccgaactgcagcacgccggcctggccgcgccccagccctttgcctgcaccgtactgctg
tcgcgccgcgtgtttcccgacgcgcccagccacagcctgggccgcatcaccgaccacctg
ggcctgccgcgcaccggccgcgcccaccgcgcgctggccgacgccgaaatggccgccgcc
ctgctggcacgcatgcagcgcgagctgtgccagcgctttggcgtcccctggcccgatcac
gccctgctgatgcagctgcagcgctgcgcgcgccagtccatcggcaagctgctggacagg
ctgtcaacgggcgcggctcacacctcatag

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