Diaphorobacter limosus: P4826_13055
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Entry
P4826_13055 CDS
T10112
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
dls Diaphorobacter limosus
Brite
Enzymes [BR:
dls01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
P4826_13055 (gyrB)
DNA replication proteins [BR:
dls03032
]
Prokaryotic type
DNA Topoisomerases
P4826_13055 (gyrB)
DNA repair and recombination proteins [BR:
dls03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
P4826_13055 (gyrB)
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WOO31335
LinkDB
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Position
complement(2702964..2705555)
Genome browser
AA seq
863 aa
AA seq
DB search
MTDANQPDPQTPAPAATDTGGYGEGAIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEV
VDNSIDEALAGHCDDIVVTIHTDNSISVVDNGRGIPTGVKMDDKHEPKRSAAEIALTELH
AGGKFNQNSYKVSGGLHGVGVSCVNALSKWLRLTVRREGKVHQILFARGFVQDRLIEVVD
GFETSPMKVTGPTEKRGTEVRFLPDTEIFKENHEFHYEILAKRLRELSFLNNGVRIRLID
ERSGKEDDFAGSGGVMGFVKFINTNKKVLHPTAFHASGTRPAESYGGIPGTEIGVEVAMQ
WNDGYNEQVLCFTNNIPQRDGGTHLTGLRAAMTRVIGKYIEQNELAKKAKVEVTGDDMRE
GLCCVLSVKVPEPKFSSQTKDKLVSSEVRAPVEDIVGKLLTEYLEEKPQDAKILCGKIVE
AARAREAARKAREMTRRKGVLDGMGLPGKLADCQEKDPALCEIYIVEGDSAGGSAKQGRD
RKFQAILPLRGKILNVEKARYEKLLSSQEIITLITALGTGIGKSSEDDFSGKGKSGADDF
DAAKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQMPELVERGHIYIAQPPLYKVKNGKEE
LYLKDAAALDGFLLRVALNNASVSTGGEAARVLSGEELAALARTHQHAEHVITRLSAFMD
AEALRAAADGVAFRLDTLEDAQASAIELQAKLRELNVNGVPADVTGEIDPRSDKPVLRIS
RHHHGNIKSSLITQDFVAGDDYATLAEAANSFRGLIQEGAKVTRGEGDKAKEEKVSDFRE
AMAWLISEAERTTARQRYKGLGEMNPEQLWETTMDPAVRRLLRVQIDDAIEADRVFTMLM
GDEVEPRRDFIETNALRAGNIDV
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgcgaaccagcccgatccacagacccccgctcccgcagccaccgacaccggc
ggctacggcgaaggcgccatccagatcctggagggcctggaggccgtgcgcaagcgcccg
ggcatgtacatcggcgacacgtccgatggcaccggcctgcaccacctggtttttgaagtg
gtggacaactccatcgacgaggccctggccgggcattgcgacgacatcgtcgtcaccatc
cacaccgacaactccatcagcgtggtggacaacggccgcggcattcccaccggcgtgaag
atggacgacaagcacgagcccaagcgctcggccgccgagatcgcgctgaccgagctgcac
gccggcggcaagttcaaccagaacagctacaaggtctcgggcggcctgcacggtgtgggc
gtgtcctgcgtcaacgccctgtccaaatggctgcgcctgacggtgcgccgcgagggcaag
gtgcaccagattctgtttgcgcgcggcttcgtgcaggaccgactgatcgaagtcgtcgat
ggcttcgagacctcgcccatgaaggtcacgggccccacggaaaagcgcggcaccgaggtg
cgctttttgccggataccgaaatcttcaaggagaaccacgagtttcactacgagatcctg
gccaagcgcctgcgcgagttgtccttcctgaacaacggcgtgcgcatccgcctgatcgac
gagcgcagcggcaaggaagacgactttgccggcagcggcggcgtgatgggcttcgtcaag
ttcatcaacaccaacaagaaagtgctgcaccccacggccttccatgccagcggcacgcgt
ccggccgagagctacggcggcatccccggcaccgagatcggcgtcgaagtggccatgcag
tggaacgacggctacaacgagcaggtcctctgcttcaccaacaacatcccgcagcgtgac
ggcggcacccacctgaccggcctgcgcgccgccatgacgcgcgtgatcggcaagtacatc
gagcaaaacgaattggccaagaaggccaaggtcgaggttaccggcgacgacatgcgcgag
ggcctgtgctgcgtcttgagcgtgaaggtgcccgagcccaagttcagcagccagaccaag
gacaagctggtcagctcagaagtgcgcgcgccggtcgaggacatcgtcggcaagctgctg
accgagtacctggaggaaaagccccaggacgccaaaattctgtgcggcaagatcgtcgag
gccgcgcgcgcccgcgaggccgcgcgcaaggcgcgcgagatgacgcggcgcaagggcgtc
ttggacggcatgggcctgcccggcaagctggccgactgccaggaaaaagacccggcgctg
tgcgagatctacatcgtcgagggcgactccgccggtggcagcgccaagcaggggcgcgac
cgcaagttccaggccatcctgccgctgcgcggcaagattttgaacgtggaaaaagcgcgc
tacgaaaagctcttgtccagccaggaaatcatcactctgatcaccgccctgggcaccggt
atcggcaaatccagcgaggacgacttcagcggcaagggcaagagcggcgccgacgacttc
gacgccgccaagctgcgctaccaccgcatcatcatcatgaccgacgccgacgtggacggc
gcccacatccgcaccctgctgctgaccttcttctaccgccagatgcccgagctggtcgag
cgcggccatatctacatcgcccagccgccgctgtacaaggtgaagaacggcaaggaagag
ctgtacctgaaggacgccgcggcgctggacggctttctgctgcgcgtggcgctgaacaac
gccagcgtcagcaccggcggcgaggcggctcgcgtgctgagcggcgaggagctggccgcc
ctggcacgcacgcaccagcatgccgagcatgtcatcacccgcctgtccgccttcatggat
gccgaggccctgcgcgccgccgccgacggcgtggccttccgcctcgacaccctggaagat
gcccaggccagcgccatagagctgcaggccaagctgcgcgagctcaacgtcaacggcgtg
cccgccgacgtgaccggcgagatcgacccgcgcagcgacaagcccgtgctgcgcatcagc
cgccaccaccacggcaacatcaagagcagcctgatcacgcaggactttgtcgccggcgac
gactacgccaccctggccgaggccgccaacagcttccgcggcctgatccaggagggcgcc
aaggtcacgcgcggcgagggcgacaaggccaaggaagaaaaggtgagcgacttccgcgaa
gccatggcctggctgatcagcgaagccgaacgcaccacggcccgccagcgctacaagggc
ctgggcgagatgaaccccgagcagctctgggaaaccaccatggacccggccgtgcggcgc
ctgctgcgcgtgcagatcgacgacgccatcgaggccgaccgcgtattcaccatgctgatg
ggtgacgaggtggagccgcggcgcgacttcatcgagacgaatgcgctcagggcggggaac
atcgatgtgtga
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