Diaphorobacter limosus: P4826_15005
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Entry
P4826_15005 CDS
T10112
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dls Diaphorobacter limosus
Pathway
dls03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dls00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
P4826_15005 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dls03021
]
P4826_15005 (rpoA)
03400 DNA repair and recombination proteins [BR:
dls03400
]
P4826_15005 (rpoA)
Enzymes [BR:
dls01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
P4826_15005 (rpoA)
Transcription machinery [BR:
dls03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
P4826_15005 (rpoA)
DNA repair and recombination proteins [BR:
dls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
P4826_15005 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
DUF7286
Motif
Other DBs
NCBI-ProteinID:
WOO31704
UniProt:
A0ABZ0J1W8
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All DBs
Position
3133803..3134798
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AA seq
331 aa
AA seq
DB search
MQTNLLKPKAINVEQLGHNRAKVELEPFERGYGHTLGNAIRRVLLSSMVGYAATEVTIAG
VVHEYSSIDGVQEDVVNILLNLKGVVFKLHNRDEVTLSLRKDGEGIVTARDIQTPHDVEI
INPDHVIATLSAGGKLDMQIKVEKGRGYVPGNLRRYADEATKSIGRIVLDASFSPVKRVS
YTVESARVEQRTDLDKLVLEIETNGAISAEEAVRASAKILVEQLAVFAQLDGGEIFEGQP
RGSHPPSGATFDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRK
SLNEIKEVLASRGLTLGMKLENWPPAGLDKR
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccaatttgctgaaacccaaggcaatcaacgtcgagcaacttggccacaaccgg
gccaaggtcgagctggagccgttcgagcgtggctatggccacacgctgggcaacgccatt
cgccgtgtcctgctctcgtccatggtgggttacgcagcaaccgaggtgaccattgccgga
gtcgtgcacgagtactcgtccatcgacggcgtgcaggaagacgtggtcaacatcctcttg
aatctcaaaggggtggtgttcaagctgcacaaccgtgatgaggtcaccctgagcctgcgc
aaggacggcgaaggtatcgtgaccgcacgcgacatccagacccctcatgacgtcgagatc
atcaatcccgatcacgtcatcgccacactgtcggccggcggcaagctggacatgcagatc
aaggttgagaagggtcgcggctacgtgcccgggaacctgcgccgctatgccgacgaggcc
accaaatccatcggccgcatcgtgctggatgcatcgttctcgccggtgaagcgggtgagc
tatacggtggaaagcgcccgcgttgagcagcgtaccgacctggacaagctggttctggag
atcgaaaccaacggcgccatttcggccgaggaggccgtacgcgcttctgccaagatcctg
gtcgagcaactggccgtattcgcgcagctcgatggcggcgagatcttcgaaggtcagccg
cggggttcacatcctcccagcggcgccacgtttgatccgattctgctgcgtcccgtagac
gagctggaactcaccgtgcgctcggccaactgcctcaaggcggagaacatctattacatc
ggcgacctcatccagcgcaccgagaacgagctgctcaagacgcccaacctcggccgcaag
tcgctcaacgagatcaaggaagttctggcttcgcgcggtctgacactgggcatgaagctc
gagaactggccgcccgccggcttggacaagcgttaa
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