KEGG   Diaphorobacter limosus: P4826_18700
Entry
P4826_18700       CDS       T10112                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
dls  Diaphorobacter limosus
Pathway
dls03030  DNA replication
dls03410  Base excision repair
dls03420  Nucleotide excision repair
dls03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dls00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    P4826_18700 (polA)
   03410 Base excision repair
    P4826_18700 (polA)
   03420 Nucleotide excision repair
    P4826_18700 (polA)
   03440 Homologous recombination
    P4826_18700 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dls03032]
    P4826_18700 (polA)
   03400 DNA repair and recombination proteins [BR:dls03400]
    P4826_18700 (polA)
Enzymes [BR:dls01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     P4826_18700 (polA)
DNA replication proteins [BR:dls03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     P4826_18700 (polA)
DNA repair and recombination proteins [BR:dls03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     P4826_18700 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     P4826_18700 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH_2
Other DBs
NCBI-ProteinID: WOO32383
UniProt: A0ABZ0J2X4
LinkDB
Position
3880538..3883297
AA seq 919 aa
MSESKTLVLVDGSSYLYRAFHAMPDLRAVPGDPASSPTGAIRGMINMLQALKKEVPADYA
VCVFDASGPTFRDDIYADYKANRSPMPDDLRAQIAPIHEVVRLLGWPVLAIAGVEADDVI
GTLAKTAAAQGLRVVISSGDKDLSQLVDERITIIDTMNGKRRDVAGVTAEFGVPPALMVD
FQTLVGDAVDNVPGVPKVGPKTAAKWLMEYGSLDALVASAGAIKGVAGENLRGALDWLPT
ARSLVTIKTDCELADHVAGLPALDSIAVGAEQTGELADFYQKYGFKSLARALEPQAQPAS
GDLFAQPDASTVAVQAQRRDVAYDIILTWAQLDAWLARIQAAPLVAIDTETTSLDELRAA
IVGISFSVEPGAAAYIPLAHEGPDAPAQLPLAEVLARLKPWLEDPARLKLGQHIKYDRHV
FANHGVEVRGYAHDTMLQSYVLEVHKPHGLTSLAERHTGRSGISYEDLCGKGAKQIPFAQ
VPVDKAAAYSCEDSDQTLDVHRVLWPQLENDEKLRAIYELEIACSETLFRIERNGVLIDA
QQLASQSHALGQRILQLEKEAYDIAGQPFNLGSPKQLGEIFFDKLGMPVVKKTATGARST
DEEVLEKLAEDYPLPAKLLEHRSLAKLKSTYTDKLSQLADPRTGRVHTHYAQAVAVTGRL
SSNDPNLQNIPVRTAEGRRIREAFIAPPGRVIASCDYSQIELRIMAHISGDEALLRAFHD
GLDVHRATASEVFGVAVDQVSSEQRRYAKTINFGLIYGMSSYGLAKSLGIDNQAAKNYID
RYFQRYPGVWQYMQETKAQAKARGYVETVFGRRLVLPEINSPNGPRRAAAERAAINAPMQ
GTAADLIKKAMVAVQQVLDAQKPGVLMIMQVHDELVFELPEAEVDWLRLEVPRLMAGVAQ
LKVPLLAEVGVGPNWEQAH
NT seq 2760 nt   +upstreamnt  +downstreamnt
atgagtgaatccaaaaccctggtgctggtcgatggttccagctacctgtaccgcgccttc
cacgccatgcccgacctgcgcgccgtgccgggcgacccggccagcagccccacgggggcc
atacgcggcatgatcaacatgctgcaggcgctcaagaaagaggtgccggccgactacgcg
gtctgcgtgttcgacgcgagcggccccaccttccgcgacgacatctacgccgactacaag
gccaaccgctcccccatgcccgacgacctgcgcgcgcagatcgcgcccatccacgaggtg
gtgcgcctcttgggctggccggtgctggcgattgccggggtggaggccgacgacgtcatc
ggcacgctggccaagacggccgcggcccagggcttgcgcgtggtgatatcgagcggcgac
aaggacctgagccagctggtggacgagcgcatcaccatcatcgacaccatgaacggcaag
cgccgcgacgtggccggggtgacggccgagtttggcgtgccgcccgcgctgatggtggac
ttccagaccctggtgggcgacgccgtggacaacgtgccgggcgtgcccaaggtcggcccc
aagaccgctgccaagtggctcatggaatacggctcgctggacgcgctggtggccagcgcc
ggcgccatcaagggcgtggcaggcgagaacctgcgcggcgcgcttgactggctgcccacg
gcgcgcagcctggtcaccatcaagaccgactgcgagctggccgatcatgtggcgggtttg
cctgctcttgattcgatagctgttggcgcagaacagacgggcgaactggccgatttttat
caaaaatacggcttcaagagcctggcgcgcgcgctggagccccaggcgcagccggccagc
ggcgacctgtttgcccagcccgacgccagcaccgttgccgtccaggcccagcggcgcgac
gtggcctacgacatcatcctgacctgggcgcagctcgatgcctggctggcccgcatccag
gccgcaccgctggtggccatagacaccgaaaccacctcgctggacgagctgcgcgccgcc
atcgtcggcatctccttcagcgtggagccgggggccgccgcctacatcccgctggcacac
gaaggcccggacgcgcccgcgcagctgccgctggccgaggtgctggcgcgcctcaaaccc
tggctggaagacccggcgcgcttgaagctgggccagcacatcaagtacgaccgccatgtg
tttgccaaccacggcgttgaggtacgcggctacgcccacgacaccatgctgcaaagctat
gtgctggaggtgcacaagccccacggcctgaccagcctggccgagcgccacacgggacgc
agcggcatcagctacgaagacctgtgcggcaagggcgccaagcagataccgttcgcgcag
gtgccggtggacaaggcggcggcctattcctgcgaggactcggaccagaccctggacgtg
caccgcgtgctctggccacagcttgagaacgatgaaaaactgcgcgccatctacgaactg
gagatcgcctgcagcgaaacgctgttccgcatcgagaggaacggcgtgctgatagacgcg
cagcagctcgccagccagagccacgccctgggccagcgcatcctgcagctcgaaaaagag
gcctacgacatcgccggccagccgttcaacctaggcagcccgaagcaactgggcgaaatc
ttcttcgacaagctgggcatgcccgtcgtcaagaagaccgccaccggcgcgcgcagcacc
gacgaggaggtgctggaaaagctggccgaggactaccccctgccggccaagctgctggag
caccgctccctcgccaagctcaagagcacctacaccgacaagctcagtcaacttgccgac
ccgcgcaccggccgcgtgcacacccactacgcccaggccgtggccgtcaccgggcgcctg
tccagcaacgacccgaacctgcagaacatccccgtgcgcacggccgagggccggcgcatt
cgcgaggccttcatcgccccgccgggccgcgtcatcgccagctgcgactacagccagatc
gagctgcgcatcatggcccacatcagcggcgacgaagccctgctgcgcgccttccacgac
ggcctggacgtgcaccgcgccaccgcatcggaagtgttcggcgtggccgtcgatcaagtg
tcaagcgagcagcgccgctacgccaagaccatcaacttcggcctgatctacggcatgagc
agctacggcctggccaagagccttggcatagacaaccaggccgccaagaactacatagac
cgctacttccagcgctaccccggcgtgtggcaatacatgcaggaaaccaaggcccaggcc
aaggcgcgcggctatgtcgagaccgtgttcggccggcgcctggtgctgcccgagatcaac
tcccctaacggcccgcgtcgcgccgcggccgagcgcgccgccatcaacgcccccatgcag
ggcacggccgccgacctgatcaagaaggccatggtggccgtgcagcaggtgctggacgcg
caaaagcccggggtgctgatgatcatgcaggtgcacgacgaactggtgttcgagctgccc
gaagccgaggtggactggctgcgcctggaggtgccgcgcctgatggccggcgtggcgcag
ctgaaagtgccgctgctggccgaggtgggcgtggggccgaattgggagcaggcgcattga

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