Diaphorobacter limosus: P4826_19295
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Entry
P4826_19295 CDS
T10112
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dls Diaphorobacter limosus
Brite
KEGG Orthology (KO) [BR:
dls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dls03009
]
P4826_19295 (rimO)
Enzymes [BR:
dls01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
P4826_19295 (rimO)
Ribosome biogenesis [BR:
dls03009
]
Prokaryotic type
ribosomal protein modification factors
P4826_19295 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
WOO32493
LinkDB
All DBs
Position
4006122..4007513
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AA seq
463 aa
AA seq
DB search
MSEALSPTKNPKIGFVSLGCPKNLTDSELILTQLSAEGYETSKTFQGADLVIVNTCGFID
DAVRESLDTIGEALADNGKVIVTGCLGARADDGGGNLVKGVHPNVLAVTGPHATQEVMEH
VHQHLPKPHDPFIDLVPGAFSEAGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSR
PIGDVLKEARALFEGGVKELLVVSQDTSAYGVDVKYRTGFWDGKPVRTRLLELVQQLGEI
ARGYGAWVRLHYVYPYPSVDDIIPLMADGLVLPYLDVPLQHSHPDVLKRMKRPASGEKNL
ERIQRWREMCPELVIRSTFIAGFPGETEEEFEHLLQFLREAQIDRAGCFAYSNVNGAAAN
DLPGMLPMELREERRARFMAVAEEVSTARLQRRVGQTLQVLVDKSVGLGKKGGVGRSWAD
APEIDGLVHLLPPEKISKTYKVGDFVKARIVGTQGHDLVGVPV
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcactctccccgacaaaaaaccccaagatcggcttcgtcagcctgggctgc
cccaagaacctgacggactccgaactcatactcacccagctctccgccgagggctacgag
acctccaagaccttccagggcgcggatctggtcatcgtcaacacctgcggcttcatcgac
gatgccgtgcgcgagagcctggacacgattggcgaggccctggccgacaacggcaaggtc
atcgtcaccggctgcctgggcgcgcgcgccgatgatggcggcggcaacctggttaagggc
gtgcacccgaatgtgctggccgtcaccggcccgcatgccacgcaggaggtgatggagcat
gtgcaccagcacctgcccaagccgcacgaccctttcatcgacctggtgcccggcgccttc
agcgaggccggcatcaagctcacgccgcgccactacgcctacctgaagatctccgagggc
tgcaaccaccgctgcaccttctgcatcattccgtcgatgcgtggcgacctggtgtcgcgc
ccgatcggcgatgtgctgaaggaggccagggcgctgttcgagggcggtgtgaaggagctc
ttggtggtcagccaggacacctcggcctacggcgtggacgtgaaataccgcacaggtttt
tgggacggcaagccggtgcgcacgcgcctgttggagctggtgcagcagctcggcgagatc
gcccgggggtacggcgcctgggtgcgtctgcactacgtttatccgtacccgagcgtggac
gacatcatcccgctgatggccgacggcctggtgctgccctacctggacgtgcccctgcag
cacagccaccccgatgtcctgaagcgcatgaagcgcccggccagcggcgagaagaacctg
gagcgcatccagcgctggcgcgagatgtgccccgagctggtgatacgcagcaccttcatc
gccggctttcctggcgagacggaagaagagttcgagcacctgctgcagttcctgcgcgag
gcgcagatcgaccgcgccggctgctttgcctatagcaacgtcaacggagccgcggccaat
gacctgccgggcatgctgccgatggagctgcgcgaggagcgccgtgcacgcttcatggcc
gtggccgaagaggtctccaccgcccgcctgcagcgccgcgtgggccagaccctgcaggtg
ctggtggacaagtccgtgggcctgggcaagaagggcggcgtgggtcgcagctgggccgat
gcgcccgagatcgacggcctggtccatctgctgccgcccgagaagatcagcaaaacctac
aaggtgggcgacttcgtcaaggcgcgcatcgtgggcacgcaggggcatgacctggtgggc
gtgccggtctga
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