Diospyros lotus (date-plum): 127786556
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Entry
127786556 CDS
T10632
Name
(RefSeq) RING-H2 finger protein ATL16-like
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
dlt Diospyros lotus (date-plum)
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dlt04121
]
127786556
Enzymes [BR:
dlt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127786556
Ubiquitin system [BR:
dlt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127786556
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
Prok-RING_4
Prok-RING_1
zf-RING_16
zf-RING_4
zf_RING_Vps8
zf-RING-like
Baculo_IE-1
PHD_NSD
zf_RING_Vps8_fungal
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
127786556
NCBI-ProteinID:
XP_052169988
LinkDB
All DBs
Position
12:2985423..2986812
Genome browser
AA seq
306 aa
AA seq
DB search
MGTQPLSQIKNQPPPPPPADNGFPILAIAVLCIMATAFLLVSYYIFLTKCCLNWQQLDPL
RRFSISRARRNEDPLTAYSPSLQSHGLDEMLIREIPTFQFGKAEETSLNKCVVCLNEFQE
LDMLRVLPSCGHAFHLDCIDIWLQTNANCPLCRTSISGKTRNPIDRIVAPTSSPQDPQPF
TDSQMGGDEDFVVIELGGAARQPERRSESPRKFERKPRKFHRVSITGDEWIDVREKDEQF
TVQPIRRSFSMDSASDRLVYMAVQEAIRQNGGVSNGEESSSSRGRRSFFPFGHGRGSRNA
VLPIEF
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgggaactcagcctctgtctcagataaaaaaccagccgccgccgccgccgccggcggac
aatggcttcccgattctagccattgcagttctctgcatcatggccacggcctttttgcta
gtcagctactacatcttcctcaccaaatgctgcttgaactggcaacaactggacccgctt
cgccgcttctccatctccagggcgcgaagaaatgaagacccattgacggcctattctccc
tcgttgcagagccacggcctggacgagatgctgatccgggagatccccactttccagttc
ggcaaagcggaagagacgagcttgaacaagtgcgtggtttgcttgaacgagtttcaggag
ctggatatgctgagagtgcttccgagttgcggccacgcgttccacctggattgcattgac
atatggctccagaccaacgccaactgcccgctttgcagaaccagcatttcggggaaaacc
aggaaccccatcgaccggattgtggcgccgacctcttcgccgcaggatccgcagccgttc
acggattcccagatgggcggtgatgaagatttcgtggttattgaactgggcggcgctgct
agacaaccggagagaagaagcgagtcgccgagaaagttcgagcggaagccgagaaagttt
caccgtgtttcgatcacgggcgacgagtggattgacgtgagggagaaagacgagcagttc
actgttcaacccatcaggagatctttctccatggattctgcttccgataggctcgtttac
atggcggttcaggaggccatacggcagaacggtggcgttagcaacggagaagagtcgagt
agtagcagaggccggagatccttctttccgttcggccatggccggggatcgagaaatgcc
gttcttccgatcgagttctag
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