Diospyros lotus (date-plum): 127786600
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Entry
127786600 CDS
T10632
Name
(RefSeq) LOW QUALITY PROTEIN: protein CHROMATIN REMODELING 8
KO
K10841
DNA excision repair protein ERCC-6
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
127786600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dlt03036
]
127786600
03400 DNA repair and recombination proteins [BR:
dlt03400
]
127786600
Chromosome and associated proteins [BR:
dlt03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
127786600
DNA repair and recombination proteins [BR:
dlt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
127786600
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
ResIII
HDA2-3
WHD_SOWAH
Motif
Other DBs
NCBI-GeneID:
127786600
NCBI-ProteinID:
XP_052170054
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All DBs
Position
12:2657001..2666267
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AA seq
1212 aa
AA seq
DB search
MEEEEEDRVLLSSLGVTAANPDDIVRDLLAEERNHAGESSGAGGSTEEEPLDGLKNSKVS
STSHAELYNKLRAVEIEIDAVASTVDQVKNLGRNENDVYDTREQGDKEDESHNDLTLQHA
LATDRLRSLRKRKAQLEKDISDLGADEPTKCNKYDNVIQDLVREEPRTKSRLKEVQKSSK
NLKKRKKLVSFNEDGDFDAVLNAASTGFVETERDELVRKGILTPFHKLRGFERRIQQPGP
SNRNNVLEEEDGTDDLASTSIAKAVRSISEASQARPTTKLLDSESLPKLEAPTFPFQRLK
TPLKIPQSQEKETKKKKDTFRKKRRPLPGKKWRKLASYDEELLDEYEDDMMTFSYEDENQ
DGEDVDGPFVTLEGGLRIPETIFSQLFDYQKVGVQWLWELHCQRAGGIIGDEMGLGKTIQ
VLSFLGALHFSNMYKPSIIVCPVTLLRQWKREARKWYPSFRVEILHDSAQDPRKKRSESY
ESDSGSEELLNSESEQNLSSNNTKKWDSLINRVLRSHSGLLITTYEQLRLNGDKLLDIEW
GYAVLDEGHRIRNPNAEITLVCKQLLTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVL
PVFEAEFSVPISVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKVDVNAQLPKKTEH
VLFCSLTAEQRSVYRAFLASSEVEQIIDGSRNSLSGIDVMRKICNHPDLLEREYSHQNPD
YGNLERSGKMKVVAQVLEVWKEQGHRVLLFTQTQQMLDILQNFLISGGYNYRRMDGMTPV
QQRMALIDEFNNSDDIFVFILTTRVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRI
GQTRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQRRFFKARDLKDLFTLNDDK
DSGSTETSNIFSQLPGEVNFFGIQQDSQDGQKSVKMASENADASINQENNSDFEPSKRKG
KQKANQSDGGDDEETNILRSLFDAHGIHSAVNHDVIINAHDEEKVRLEEQAAQVAHRAAE
ALRESRILRSRESISIPTWTGKAGAAGAPSSVRKKFGSTLNSKLINNSKPGVEFSGSNMS
NGITAGPSPGKALSSTELLARIRGSKERATNNGSEHQPGLTSSSPSTERTVANNPYRASR
TPSGLQPEVLIRQICTFIQRSGGRSTSASIVNHFKDRVPSTDLPLFKNLLKEIAILQKGS
NGSSWVLKQDYQ
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaagaggaagatagagttctcttgagcagtttgggtgtcacagctgcaaac
cctgatgatattgtgcgagacttattagcggaggaaagaaatcatgctggggaaagtagt
ggagctgggggaagcacagaggaggaacctcttgacggtttgaaaaacagcaaagtgtca
tctaccagccatgcagaactctataataaattgcgagctgtagaaattgaaatagatgct
gttgcatctactgttgatcaggtcaagaaccttggaagaaatgaaaacgatgtctatgac
accagagaacagggagataaagaagatgaatctcataatgatttaaccttacagcatgca
ctagcaactgatagactcagaagcctgaggaaaagaaaggctcaacttgagaaagacatc
tcagatttgggggcggatgaacctaccaaatgtaacaaatatgacaatgtgatacaagat
cttgttagagaagagcccagaacgaagtcaaggttgaaagaagttcagaaatcaagcaag
aatctgaaaaagcgtaagaaattagtatcattcaatgaagatggtgattttgatgccgtg
ttaaatgcagcatcaacgggatttgttgaaacagaaagggatgagttagttcggaaagga
attttaactccctttcataagctcaggggctttgagcgtcgtattcagcagccagggcca
tctaataggaataatgtgcttgaggaagaagatgggactgatgatcttgcttcaaccagt
atagctaaagctgtaagatctatatcagaggcttcccaggctcgtccaacaaccaagctg
cttgattcagagtcactgccaaaacttgaggcacccacttttccttttcaaagattaaaa
acaccattgaagatcccccagtcacaagaaaaagagacaaagaagaaaaaagatacattc
aggaaaaagagaagaccattgccagggaagaaatggagaaaattagcttcatatgatgaa
gaacttttggatgaatatgaggatgatatgatgacattcagttatgaagatgaaaaccaa
gatggtgaagatgtagatggtccttttgtaacacttgaaggtggtctgaggattccggaa
accattttcagccaactttttgactatcaaaaagttggggtacagtggttatgggaactc
cattgtcaaagagcaggtggaatcattggagatgagatgggccttggtaaaaccatccag
gtcttatcttttcttggtgcattgcatttcagtaatatgtacaagccaagcataattgtc
tgccctgttacactcttgaggcaatggaagagggaagcacggaagtggtacccgagcttt
cgtgtggagatactacatgattctgctcaggatccgaggaagaaacgctctgaatcttat
gaaagtgattctggaagtgaagagttgcttaacagtgagagcgaacaaaatctatcttct
aataataccaaaaaatgggattccttgataaaccgtgtattgagatcacattctggtttg
ctgattaccacttatgagcaactccgtttaaatggggacaagttgcttgatattgaatgg
ggttatgcggttttagatgaagggcaccgaattcgaaatccaaatgctgagattactttg
gtttgcaagcagctgttgacagttcatcgcataataatgactggtgcaccaattcagaac
aagcttactgaattgtggtctttgtttgattttgttttccctggaaaattgggtgtattg
cctgtgttcgaggctgaattttctgttcccatatctgttggtggttatgctaatgcttca
ccattacaagtatccacagcatacaggtgtgcagtggttttacgtgacttaatcatgcct
tatcttctccgaagaatgaaggtcgatgtgaatgcacaactcccaaagaaaaccgagcat
gtcctcttttgcagcctaactgctgagcagcgatcagtgtatcgagcatttcttgccagt
tctgaggtggagcagatcattgatgggagcagaaactctctttctggaattgatgtgatg
cgtaaaatttgtaaccaccctgatttgcttgagagagaatattctcaccagaatccagac
tatgggaatcttgaacgcagtggaaaaatgaaagttgttgcccaagtgcttgaagtgtgg
aaggaacaaggtcatcgtgttcttcttttcacacaaactcaacaaatgcttgatattctt
cagaattttcttatttctggtggctataactatcggagaatggatggtatgactcctgta
cagcagagaatggccttgatagacgaatttaacaactctgatgatattttcgtcttcatt
ctcacaacaagagtaggtggtctaggtacaaatttaactggagcaaacagggtgattatc
tttgatcctgactggaatccttccacggacatgcaggctagggagcgtgcatggcgtatt
ggtcagactagggatgtaactgtttacagactgataacccgaggaacgatagaagagaag
gtgtatcaccgacaaatttacaaacacttccttactaacaaaatattgaagaatccacag
cagagaaggttcttcaaagcccgagatttgaaggacctctttaccttgaatgatgataaa
gacagcggctctacagaaacatctaatattttcagtcagttaccaggagaagtaaatttt
tttgggattcagcaggacagccaggatggacagaaatctgtgaaaatggcttcagaaaat
gctgatgcttcaatcaatcaagagaacaattctgattttgaaccatccaaaaggaagggc
aaacagaaagctaatcagagtgatggtggagatgacgaagaaacaaatattctgaggagt
ctttttgatgctcatggaattcacagtgccgtgaatcatgatgtgattatcaatgcccat
gatgaagagaaggtgaggcttgaggaacaagctgctcaagttgctcatagagcagcagaa
gcactgcgtgagtcgcgaatacttcgaagccgggaaagcatatctatcccaacatggact
gggaaagctggtgctgctggtgcaccttcgtcggttcgaaaaaagtttggatcaactcta
aactccaagttgattaataactctaaacctggtgtagaattttcgggttcaaacatgtcc
aatggtatcactgccgggccatctcctggtaaagcattatcttcaactgaattacttgca
agaatacgagggagcaaagaaagagcaacgaacaatgggagtgaacatcaacccggtttg
acttcaagttctcccagcacagaaaggacagttgccaacaatccttatagggcatcccgt
accccatctggactgcagccggaagtattgattcgtcagatatgtacttttatacagcga
agcggcggtcgatctacctctgccagcatcgtgaaccatttcaaggacagggtaccttca
accgatttgccattgtttaagaatcttctcaaggaaattgcaattttacagaaaggttcc
aatggatcgtcatgggttttgaaacaagactatcaatga
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