Diospyros lotus (date-plum): 127786680
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Entry
127786680 CDS
T10632
Name
(RefSeq) protein LATE ELONGATED HYPOCOTYL isoform X1
KO
K12133
MYB-related transcription factor LHY
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
127786680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dlt03000
]
127786680
Transcription factors [BR:
dlt03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
127786680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
127786680
NCBI-ProteinID:
XP_052170201
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Position
12:28346556..28367865
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AA seq
734 aa
AA seq
DB search
MDTCSSGEDLVIKTRKPYTITKQRERWTEEEHNRFLEAIKLYGRAWQRIEEHIGTKTAVQ
IRSHAQKFFTKLEKEALVKGVPIRQTFDIEIPPPRPKKKPSNPYPRKTGGGSLTPHVGAA
KDGKKLSPSSLSAGKQILDLERLPLSQKCGGDVNPVNAKENQDDGNYSEILSLSQEAQDS
VPTPGTFREFVPMMVSTQDETKESYDTVEPNGAHNASNFKSSNFSHQKFFQGMKTDEMSN
PENVGPLLSSDLQATQSYPRHVPVHVLNGNLGMSTHNVSPDLAYQESKFHQIGETHGLPN
LCNPSASAITEHQISASRSSVYQSFPPFHPLFGHICNNEDEYRSYLHLSSSFSSLIVTTL
LQNPAVHAAASFAASFWPCTNMEASADSPVGTLGGFPSKPMNAAPSTAAIAAATVAAATA
WWAAHGMLPMCSAFQPAFSCTPSATTIPVDASVAAGNNDKRERAPHDLSLQNQQLDPEYS
EALDEQHSALKLPSMSSSEYEESEGAKPNATVAVADHEESATVTGLHDSNKMNSRKQVDR
SSCGSNTPSSSEVETDALEKSGKDNEESKEPDVSHTTGDCNNRRSRSISCTDSWKEVSEE
GRLAFMALFSRERLPQSFSPPHDLKNKEYQKKNGEKDKQKTDEKAEDASLLDLNSKAAVT
TCSHEAVENKVVLRGEECMLRMEIGLGKLKARRTGFKPYKRCSVEAKEGKMAIVSNQGEE
KASKRIRLEGEASS
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggacacctgctcctctggagaggacttggttatcaagacacggaaaccctatacaatc
accaagcaacgtgaacgatggacagaggaggagcataacaggtttctagaagccataaag
ctctatgggcgagcttggcaacgaattgaagaacatatagggaccaagactgctgtgcag
atcagaagtcatgcacagaaattctttacaaagttggagaaggaagctcttgttaaagga
gttccaattcgacaaacttttgacatagagattcctcctccacgcccaaaaaagaaacca
agcaatccttatcctcgaaagactggtggaggatcactcacaccacacgtgggagctgca
aaggatggaaaaaaattgtcgccatcttctctctctgctggtaaacaaatactggacttg
gagagactaccactttctcagaaatgtggcggagatgtaaatccagtaaatgcaaaagaa
aaccaggatgatggaaactactctgaaattttatccctttctcaagaagctcaagattct
gtgccaacaccaggcacttttagggagtttgtgccaatgatggtgagtacccaggatgaa
acaaaagaatcttatgatactgttgaacctaatggagcacataatgcgtcaaacttcaaa
agttctaacttttcacatcagaagttttttcaaggcatgaaaacagatgaaatgagcaac
cctgaaaacgttgggccattgctatcgagtgatctacaagcaacacaaagctatcccaga
catgttcctgtgcatgttctaaatggaaacctaggaatgagcacccacaatgtttctcca
gatttggcataccaagaatccaaatttcaccaaattggagaaactcatggactacctaac
ctatgtaatccatctgcatctgcaatcacagaacatcagattagtgcatcaagatcttct
gtatatcaatcatttcctcctttccatcctctttttggccatatctgcaacaatgaagat
gagtaccgatcttaccttcatctttcctcctccttttcaagtcttattgtaacaaccctg
ctacagaatccagcagtccatgctgcagcaagctttgcagcttcattctggccttgcaca
aatatggaagcttctgcagattctcctgtgggcaccttgggaggttttccatcaaagcca
atgaatgcagctcctagtacagcagctattgctgctgctacagttgcggctgcaactgca
tggtgggcagctcacggaatgctgcccatgtgcagtgcttttcagcctgccttttcttgt
actccatctgcaactacaattccagtagatgctagtgttgcagcaggcaacaatgacaag
agagagagagctcctcatgatctttccttgcaaaatcaacagctggacccagaatattct
gaagctcttgacgaacagcattctgctttgaaattgccaagtatgtcatcatcagaatac
gaggaaagtgaaggcgcaaaaccaaatgctacagtagctgttgctgatcatgaggaatct
gctacagtaactgggctccatgattcaaacaagatgaacagcagaaagcaggtggatcgt
tcttcttgtggttccaacacgccttcaagcagtgaagtagagacagatgctttagagaag
tctggcaaagacaatgaagagtcaaaagaacctgatgtaagccatacaactggtgactgt
aacaatcgtcgcagtagaagcatcagctgtacagattcatggaaagaggtctctgaagag
ggccggttagcttttatggcactcttctctagagagagattgccacaaagcttttcaccg
cctcatgatctgaagaacaaggagtatcagaagaagaatggtgaaaaggacaagcagaag
acggatgagaaggcggaagatgcatcactgctggaccttaacagcaaggcagcagttact
acttgtagccatgaggcagtggagaataaggtcgtcttgagaggtgaagagtgcatgctg
agaatggagattgggctgggaaagctcaaggcgcggcgaacagggttcaaaccatataaa
aggtgttcggtggaggccaaggagggcaagatggcaattgtgagcaaccaaggtgaagag
aaagcctccaagagaatacggctagaaggggaagcttccagttga
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