Diospyros lotus (date-plum): 127786840
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Entry
127786840 CDS
T10632
Name
(RefSeq) transcription initiation factor TFIID subunit 4b-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127786840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dlt03021
]
127786840
03036 Chromosome and associated proteins [BR:
dlt03036
]
127786840
Transcription machinery [BR:
dlt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
127786840
Coactivators
SAGA/TFTC/STAGA complex
127786840
Chromosome and associated proteins [BR:
dlt03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
127786840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
127786840
NCBI-ProteinID:
XP_052170491
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All DBs
Position
12:1910486..1923187
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AA seq
932 aa
AA seq
DB search
MDPSIMKLLEEDEDETMHSGADVEAFTAALNRDIEGNTSTSQHSDSLSVPLSQGSHHTSS
QVFPQWQTFSQVESANGQNQQNPNGFQQQEQHMSEMELKQHDSGPEKQQQQLESSEELNS
NPFKQEQLQEDCQPQKVEQNTVHFSQTTGVQNSEKNPVRVREPDRTHNLESESQHLNFQK
MKGHQTIASEQGMNSVNRGKQMPFALLLPVIQTQLDKDRAMQLETLYLKLKKNEIAKDGF
VRHMRSIVGDQMLKMAIYKLQAQAQASARPQQLKMPSVGVNQGAVRQSFSQPHQKGITSE
DVSYVPSSTAQLSTHSSNAKMDDNGQKSQEMAHQLDLHGMPSSQMSSSNLSNINQEKERS
TMPIHGLSKQQSQHLQFSQTSFPAYGSTGVNYHPLSGTKDNASTSSLKNQPHDSQLMQGP
VYQSTGAERQHSFIEPKRVHGGSGTLPHLTGSSSFPHNSPHWQSSSGKEQKSGAPSISYV
KQEPLDQGAEQQNTSQVSSPGGPSSLPSLPGERVNAPTGISNDKSLEMQSSRMGFSTSMS
TVAPNSALASMSMQLEPNISLNSRIPSPAGAGNSTKTPVKKPSIGQKKPLESLGSSPPLP
SKKQKISGAFSDQSIEQLNDVTAVSGVNLREEEEQLFSGPKEDSRISEASRRVVQEEEER
LILQKNPLKKKLAEIMSRCGIKNVSNDAERCLSLCVEERIRGLLSNLVRLSKQLQRIDIE
KRRHRTLVISDVRQQIMAINRKAREEWERKQAESGKLEKQSEQEGNAGVDVSKEKDEGRA
KALKGNKEEDDKMRATAANVAARAAVGGDDMLSKWQLMAEQARQKREGGIDAASGSQQVN
DVSRKPPLTREQNAADNQEAEQSGQPSAGQPTGLSGKFTRNQGAVVPPSKQVRSICMKDV
IAVLEREPQMSKTPLVYILYEKAGADDDAVAE
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggacccttctattatgaagctccttgaagaggacgaggatgaaacaatgcattccggg
gcagacgtggaagcatttacagcggctttgaacagggacatagagggcaatacttctaca
tcccaacactctgattcactcagtgtacctctatctcaaggaagccatcacacttccagt
caggtgtttccacaatggcaaacttttagtcaagttgaaagtgccaatggtcaaaatcaa
caaaatccaaatggtttccagcaacaggagcaacatatgtctgaaatggaacttaagcaa
catgattctggtcctgaaaaacaacagcaacaattggaatcctcagaggagttgaatagc
aaccccttcaagcaagagcaactacaagaagactgccaacctcagaaagtggaacaaaac
accgtccatttttctcaaacaacgggtgtccagaattctgaaaaaaatcctgtccgcgtt
agggagccagacagaacacataacctagagagtgaatctcaacatctgaactttcagaaa
atgaaaggtcatcagactattgcatctgagcaaggaatgaattcagtgaatcgagggaaa
caaatgccttttgctctgctgctaccagtcatacaaacccaacttgacaaggacagagca
atgcaattagaaactctttatcttaaattgaagaaaaatgaaatcgccaaagatggattt
gtccggcatatgagaagtattgtaggggaccagatgctcaagatggcaatatataaactg
caagcgcaggctcaagcttctgcacgaccacaacaactgaaaatgccatctgttggggtg
aatcagggagctgttcgtcagtcattttcacaacctcatcagaagggtataacttctgaa
gatgtttcttatgtcccctcttcaacagcacaattgagtactcattcaagcaacgcaaag
atggatgataatggtcaaaaatcccaagagatggcacaccaattagatttgcatggaatg
ccatcaagccagatgtcttcaagcaatttgagcaacataaaccaagaaaaggaacggtcc
acaatgcccatacatggacttagcaagcagcaatcacaacatttgcagttctcacagaca
tcttttcctgcctatggaagtacaggagttaattatcatccactttctgggacaaaggat
aacgcttcaacatcatctcttaaaaatcagccccatgattcacaattgatgcaaggtcca
gtttatcaaagtactggtgcagagaggcaacattcttttattgaaccaaagagagtgcat
ggtggaagtgggacacttcctcacttgacaggcagttcatcttttccacataattcccct
cattggcagtcatcaagtggtaaagagcagaaaagtggtgctccatcaatttcatatgtt
aagcaagaacctcttgatcaaggagctgagcaacaaaacacatcccaggtgtcctcccca
gggggaccatcttctcttccttccttaccaggtgaacgtgtcaatgcacctactggaatt
tcaaatgataaatctcttgagatgcagtcctcaaggatgggtttctcaacatctatgagc
acagtggctccaaattcagcattggcatcaatgtcgatgcagctggaacctaatatttcg
ttaaattctcggatcccatctccagctggggcaggaaatagtacaaagacacccgtcaaa
aaaccatctattggccaaaagaaaccacttgaatccctgggttcttcacctcctcttcca
agtaagaagcaaaaaatatctggggccttctcggatcaaagcattgaacaactcaatgat
gtaactgctgtcagtggagttaatcttagggaagaggaagaacaactgttttctgggccc
aaagaagatagtagaatctcagaagcatctcgaagggttgttcaagaagaagaagaaaga
cttattttgcagaaaaatccccttaaaaagaaattggcagaaatcatgtcaagatgtggc
ataaagaacgtgagtaacgatgcagagcgatgcttgtcattgtgtgtagaggaaagaatc
cgtggactgctaagtaatcttgtcagactgtcaaaacagttgcagcggattgatattgag
aagcgaaggcaccgaacccttgttatctctgatgttcggcaacaaatcatggcaattaac
aggaaggctagggaagaatgggaaagaaaacaagctgagtcaggaaaactagagaaacag
agtgaacaagagggtaacgccggagttgatgtcagtaaggagaaggacgaaggtcgcgcc
aaagcactcaagggaaacaaagaagaggatgataaaatgcgagcaacagctgcaaatgtt
gctgctcgagctgctgtcggtggagatgatatgttgtcaaaatggcaactaatggctgag
caggcccggcagaaacgcgagggaggaattgatgcagcttctggttctcagcaggttaac
gatgtgagccgtaagcctccattgacccgtgaacaaaatgcagcagacaatcaagaagct
gagcaatctggccaaccaagtgctggccagccaactggattaagtggaaaattcacgagg
aatcaaggcgcggtggtgcctccgagcaaacaggttcgctcaatctgcatgaaggatgtt
attgctgtgcttgaaagggaaccccagatgtcaaagacgccactggtatatatcctctat
gaaaaagcaggtgctgatgatgatgctgtagctgaatga
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