Diospyros lotus (date-plum): 127786843
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Entry
127786843 CDS
T10632
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
127786843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dlt04121
]
127786843
Ubiquitin system [BR:
dlt04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
127786843
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_4
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
127786843
NCBI-ProteinID:
XP_052170496
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Position
12:5685204..5689547
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AA seq
581 aa
AA seq
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MAYSFPEEVLEHVFSFIENDKDRNAVSLVCKSWYEIERWCRRRIFVGNCYAVSPVMMIRR
FPEVRSVELKGKPHFADYNLVPEGWGGYVYPWIAAMGRAYPWLEEIRLKRMVVTDENLEL
ISRSFNNFKVLVMSSCEGFTTDGLAAIAANCRNLRVLDLQECEVDDLSGHWLSHFPDTFT
SLVSLNISCLGSDVSSSALERLVGRCTNLSSLRLNRAVPLERLPNLLRRAPQLIELGTGA
YSADLHSDVFSSLAEAFSGCKKLKGLSGFWDVVPTYLPAAYSICSGLTSLNLSYATIESP
DLVKLVSQCHSLQRLLVLDYIEDTGLDALAASCKDLQELRVFPSDPFGPEPNVSLTERGL
VSVSEGCPKLQSVLYFCRQMSNSALVTIARNRPNLTRFRLCILEPRTPDYITLEPLDAGF
GAIVEHCKELRRLSLSGLLTDRVFEYIGTHAKKLEMLSIAFAGDSDLGLHHVLSGCDSLK
KLEIRDCPFGHKALLANAAKLETMRSLWMSSCPVSFGACKLLGQKMPRLNVEVIDERGPP
ESRPESCPVEKLYVYRTVAGPRFDMPGFVWTTDEDAALRLS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcgtactcgtttccggaggaggtgttggagcacgtgttctcgttcatagagaacgat
aaggaccggaacgcggtatctctggtctgcaagtcgtggtacgagatcgagcggtggtgc
aggcgacggatcttcgtcgggaactgctatgcggtgagccctgtgatgatgatcaggcgg
ttccccgaggtcagatccgtggagctgaaagggaagccacatttcgcggactacaatctg
gtgccggagggttggggtgggtacgtttacccttggatcgcggccatgggtagggcttac
ccttggttggaggagattcggctcaagcgcatggtcgtcactgacgagaacttggagctg
atttcacgttcgttcaataacttcaaggtccttgtgatgtcgtcttgtgagggcttcact
actgatggactcgccgccattgccgccaattgcaggaatttaagagtgttggatttgcag
gagtgcgaggtggatgatttaagtggacactggctgagccattttcctgatacgtttacc
tcacttgtctccttgaacatttcttgcttaggttctgatgtgagttcatctgctttagag
cgtctggtgggtaggtgtaccaacctttcctcacttcgtctcaaccgtgctgtacccctc
gagaggctccctaatctgctccgccgggcccctcagctaattgagctgggaactggtgcc
tactcagctgatcttcactctgatgttttctcaagcctagctgaagctttttcagggtgc
aagaagctgaagggcttatctggtttttgggatgtggttcccacttatcttcctgcagcc
tattccatctgctctgggcttacttctctgaatctgagctatgccactattgagagccct
gatcttgtgaaactggttagccagtgtcacagcttgcagcgcctattggtactggattac
attgaagacaccggccttgatgcccttgctgcttcttgcaaggatctgcaagaactgagg
gtttttccttccgatccctttggtccagaaccaaatgtgtcattgacagagcgaggcctt
gtctctgtttctgagggctgccccaagctccagtcagtcctgtatttctgccgccaaatg
tcaaattctgccttggttaccattgctaggaaccggccgaatctgacacgtttccgtctt
tgcatcctggagcctcgcactcccgattacataaccttggagcctctggatgctgggttt
ggagccattgttgagcattgtaaggagttgcgacgtctttctctatctggtcttctaacg
gatcgagtgtttgagtacattgggacccatgctaagaagctagagatgctctctattgct
tttgctggggatagtgatttgggcctccatcacgtgctgtccgggtgtgacagcctgaag
aaactggagatcagagactgcccctttggacacaaggctctcttggccaatgctgcaaag
ctggagacaatgcgatccctttggatgtcttcttgcccagtaagttttggagcatgtaaa
ttgctaggtcagaagatgccgaggcttaacgttgaagtaatcgacgagaggggacccccc
gagtccaggcccgaaagctgtcctgtcgagaagctttatgtctacaggacagtagctggg
ccgaggttcgacatgcctggttttgtatggactacggacgaagatgctgcattgaggctc
tcttga
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