Diospyros lotus (date-plum): 127786864
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Entry
127786864 CDS
T10632
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03018
RNA degradation
Brite
Enzymes [BR:
dlt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
127786864
Messenger RNA biogenesis [BR:
dlt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
127786864
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
127786864
NCBI-ProteinID:
XP_052170531
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Position
12:203623..208705
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AA seq
616 aa
AA seq
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MLQRRFLCTIVSGNHQKPRRQWPIRQVNRSNFSEALQHIKAHIRDCDFVAVSLQKTGSYS
APWHRVLPLDTAEIAYFKAKFAAERFQILQFAVCPFSVRASKVVAHPYNFHLFPRDELKI
GLPSYSFSCQSSYLSSMARQGFDFNACIYDGISYLSREQESASRERIGSPVRRKCETQPS
SDLSVADSIFVERIKARVRNWRNAFKDSSSRAEDPLINSLRKLVIGNEEYGSRPCLTITV
CSERQVQLVVEMLREFYDDLVPLSVPAKGGGTQAIQVVLTSSKEDRLLFEMELQNREEEQ
SKRVRGFREVIDLISTCQKPVVSHNSLNDFAFIHAKFLSSLPSSMEEFRRSLCPAFPNIL
DVGHLMKEMGPLKKVTNLPAAISYLKRRFFAPVDVEISHQADAGDSKIHGHNVLKITELF
AKLCSILKINPETLQHDYDNFPSALESSSNIFNPCSSSSPDPIDVDVSVWTNNTRKVDTN
NLVFLWGFRDGMSAGMLKRRLSNSHVVFSDEFDVRLVDKSCAVVVFWNPGLSSSFLDAVE
SGGLNCEPLREMISEGLQATGYQAYRRACELGLWEANLADSLDKALEDTDILSGTGSQES
LNIYWNDELIISLDDL
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagagacgcttcctttgcaccatcgtttccggcaaccaccagaagcctcgccgc
cagtggccgattaggcaagtgaacaggtccaatttctccgaggctctgcagcacatcaag
gcccacatccgcgactgcgacttcgtggccgtgtcgttgcagaagactggttcctactct
gccccttggcaccgagttctaccccttgacaccgccgagatcgcctacttcaaagccaag
ttcgccgccgagaggtttcagattcttcagttcgcagtctgcccgttctcggttagggcc
tccaaagtcgtcgcccacccatacaactttcatctcttcccgagggatgaactcaaaatt
ggcttgccttcatatagcttttcgtgtcagtcatcatacttgagctcaatggctcgacaa
ggttttgatttcaatgcctgcatatatgatggcatatcatatttatcgagggaacaagaa
tctgcttcaagagaacgaataggaagtccagtgcgtagaaaatgtgaaacacagccttcc
tctgatctttcagttgctgactcaatttttgttgaaaggataaaagcacgagtcaggaac
tggagaaatgcttttaaagactcaagctcaagggctgaagatcctttaatcaattccctg
agaaaacttgtcataggaaatgaagaatacggatcaagaccatgcttaaccataactgtg
tgcagtgaacgccaagtgcagcttgtagtagagatgctgagggaattttatgatgacctt
gtacctttatcggttccagcaaaaggtgggggtacccaggcaattcaagttgttttaaca
agttcaaaagaagacaggttactgtttgagatggaacttcaaaatcgggaagaggaacaa
agtaagcgggtccgtggctttcgggaggtcatcgatttgatttctacatgtcagaaacct
gttgtttcccacaactcacttaatgattttgcattcattcatgcgaaattcctttcttcc
ctaccttctagcatggaagagttcaggcgctccttgtgtccggctttccccaatattctt
gatgtcggccatctaatgaaggaaatggggcccctgaaaaaggtgactaatttgcctgcc
gctatttcttatttaaaaagacgattctttgcgcctgttgatgtggaaatttctcaccaa
gctgatgcaggtgacagcaagatccatggccacaatgttctgaagataacagaattgttt
gctaaactgtgctctattttgaaaattaaccccgaaactctccaacatgattatgacaat
ttcccttctgctcttgaaagctcttcaaacatcttcaatccttgttcctcaagttccccc
gacccaattgatgtggatgtctcagtttggacaaataacacaagaaaagtggacactaat
aatttggttttcttgtggggattcagagatgggatgtctgcgggaatgctaaagagacgt
ctcagtaattcccatgtggtgttctctgatgaatttgatgtgcgactggtggataagagt
tgtgctgttgttgtcttctggaatcctggcttatcatcaagctttcttgatgctgtagaa
tctggagggctaaactgtgagccactgagggagatgatctcagaaggccttcaggctaca
ggttatcaagcttataggagagcttgtgagttgggtttatgggaagcaaacttagcagat
tctttggacaaagccttagaagacactgacatcctttctggaactggttcccaggagtca
ttgaatatctattggaacgacgaattgataattagcctggatgatctgtga
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