Diospyros lotus (date-plum): 127787011
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Entry
127787011 CDS
T10632
Name
(RefSeq) replication protein A 32 kDa subunit A-like
KO
K10739
replication factor A2
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03030
DNA replication
dlt03420
Nucleotide excision repair
dlt03430
Mismatch repair
dlt03440
Homologous recombination
dlt03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127787011
03420 Nucleotide excision repair
127787011
03430 Mismatch repair
127787011
03440 Homologous recombination
127787011
03460 Fanconi anemia pathway
127787011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dlt03032
]
127787011
03400 DNA repair and recombination proteins [BR:
dlt03400
]
127787011
DNA replication proteins [BR:
dlt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
127787011
DNA repair and recombination proteins [BR:
dlt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
127787011
MMR (mismatch excision repair)
127787011
DSBR (double strand breaks repair)
HR (homologous recombination)
127787011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
RMI2
HTH_24
TrmB
tRNA_anti_2
HTH_27
Motif
Other DBs
NCBI-GeneID:
127787011
NCBI-ProteinID:
XP_052170797
LinkDB
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Position
12:complement(7132437..7137223)
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AA seq
279 aa
AA seq
DB search
MFSSQFDTTSTFNGGRFTSSQSTQATDSGSSAAKNRETSGLVPVTVKHISEATNSGDDKS
NFVIGGVDVTNVTVVGMVYDKAVRNTDVAFSLDDGTGRINCNRWVNEAFDNKEMEEIQDG
MYVRVNGCLKSFKGTTALVAFSVRPVTNFDEISFHFIECIHFHLQNSSTRLQGDATTQPQ
SVALNTTTHDGSTGYQTGLTNHLSGQFTVEGLKGIDQMVLDYLQQPLNYERERGIHRDEI
SQKLKVPVEKIMESIRTLEEEGLIYSTIDEFHFKSTTSG
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgttctctagccagttcgataccacctccaccttcaacggcggccgatttacgtcttcc
cagtcgactcaggccacggattccggctcttccgctgccaagaatcgtgaaacgagtggg
ctagttccggttactgtgaagcacataagcgaagccactaattctggcgacgataaatcc
aatttcgttattggtggtgttgacgtcactaacgttacagtggttggtatggtgtatgat
aaggctgtaaggaatactgatgttgctttctctcttgacgatggaaccggacgaattaat
tgtaacagatgggtcaatgaagcctttgataacaaggaaatggaagagatacaagatgga
atgtatgttcgtgtcaatggatgcttaaaaagctttaaaggcacaacggcattagttgct
ttttctgtcaggccagtgacaaattttgatgagatttccttccactttatcgagtgcata
catttccatttgcaaaactccagtacaaggctccaaggtgatgccacaactcaacctcag
tctgtagctttaaacaccactacacatgatggatcaactggatatcagacaggcctgaca
aatcatctctctggacaatttactgtagagggactcaagggaattgatcaaatggtgctt
gattacctgcagcaaccattgaactatgaacgggaaaggggcatacatagggatgaaatc
tctcagaagctaaaagttccggttgagaagataatggaatccatccgaactcttgaagag
gaaggcttgatatactccactattgatgaatttcacttcaaatcaactacaagtggttga
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