Diospyros lotus (date-plum): 127787146
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Entry
127787146 CDS
T10632
Name
(RefSeq) serine/arginine-rich splicing factor RS31-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127787146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dlt03041
]
127787146
Spliceosome [BR:
dlt03041
]
Common components
Common spliceosomal components
SR proteins
127787146
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RNA_bind
RRM_3
SET_assoc
RRM_5
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
127787146
NCBI-ProteinID:
XP_052170999
LinkDB
All DBs
Position
12:complement(38600309..38603468)
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AA seq
242 aa
AA seq
DB search
MRPVFCGNFEYDTRQSELERLFSKYGRVERVDMKSGFAFIYFEDERDAEDAIRGLDNRPF
GYDRRRLSVEWARGERGHPRDGSRSMANQRPTKTLFVINFDPHLTRVRDIERHFEPYGKV
LHVRIRRNFAFVQFETQDDATKALECTHMSKLLDRVISVEYALRDDGEKDDRYDSPRRSY
GRRESPYRRSPSPMYRRGRPSPDYGRSRSPVYDRYNGSSYDRPRSPEYGRYRSRSPVRRS
RT
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgaggccggtgttttgtggtaacttcgagtacgacactcgccagtcagagttggagcga
ttgttctccaagtacgggagggtggagcgtgttgacatgaaatctgggtttgcatttatt
tattttgaagatgaacgtgatgctgaagatgccatccgtggtcttgacaacagaccattt
ggatatgacaggcgcaggctgtcagtagagtgggccaggggtgaacgtggtcatcctcgg
gatggctctaggtcaatggctaaccagagacctactaaaaccttgtttgttataaacttt
gatccgcacctcacaagggtccgtgatatagagagacattttgagccttacgggaaggtt
ttacatgttcgaattcgaaggaattttgcgtttgtgcagtttgaaacacaggatgatgcg
acaaaagctctggagtgcacacatatgagcaagcttttagacagggtgatttctgttgag
tatgccctaagggatgatggtgaaaaagatgacagatatgatagccccaggagaagttat
ggcagaagggagagtccttataggcgctctccaagtccaatgtatcgcaggggtcggcct
agtcctgactatgggcgctctcgcagcccagtttatgataggtataatggttcatcatat
gatagacccagaagccctgaatacggcaggtataggagccgctcacctgtgcgaaggtca
agaacgtga
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