Diospyros lotus (date-plum): 127787191
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Entry
127787191 CDS
T10632
Name
(RefSeq) serine/arginine-rich splicing factor RS40-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127787191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dlt03041
]
127787191
Spliceosome [BR:
dlt03041
]
Common components
Common spliceosomal components
SR proteins
127787191
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_5
RNA_bind
DUF2129
SET_assoc
RRM_Nup35
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
127787191
NCBI-ProteinID:
XP_052171073
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All DBs
Position
12:36369821..36376327
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AA seq
251 aa
AA seq
DB search
MKPIFCGNLDYDAHQSDVERLFRRYGRVDRVDIKSGFAFIYMEDERDAEDAIRRLDRTEF
GRKGRRLRVEWTKQERDTRSSGSSRLSSANAKPSKSLFVINFDPINTRTRDLERHFEPYG
EISSVRIRRNFAFIQYESQEDAARALDATNMSKFMDRVISVEYAVRGDDARRNGSSPDRR
GREWSPKRSGYGRGRSPSPYHRDRDSPDYRRGSNVDYRPAPKGSPVYDRGESPINDRYPS
SQSPPRERSRS
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaatattttgtggcaacctagattatgatgctcaccagtcagatgttgagcga
cttttcagaagatatggaagagttgatagggtggatataaaatctggatttgctttcatc
tatatggaagatgagcgagatgctgaggatgcaatccgaagacttgacaggacagagttt
ggtagaaaaggtcgcagacttcgtgttgagtggactaagcaagaacgtgataccagaagc
tctggcagctcaaggttgtcttcagctaatgccaaaccctcaaaatccttatttgtcatt
aattttgacccaatcaatactagaacaagggacctggagaggcactttgaaccctatggg
gaaatatcaagtgtaaggatcagacggaactttgctttcattcagtatgaatcgcaggag
gatgctgccagagcattggatgcaacaaacatgagcaagttcatggaccgagttatttca
gtggaatatgcagttcgaggtgatgatgcaagaagaaatgggtccagccctgataggaga
ggacgtgagtggtctcccaagagaagtggctatggtcgtggtcgctctcccagtccatat
caccgagatagggatagtcctgactatcgacgtggatccaatgtagattatagacctgca
ccaaaaggaagccccgtttatgaccgaggagaaagtcccatcaacgacagatatcccagc
agccaatcgcctccaagagaaagatctcgatcttga
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