Diospyros lotus (date-plum): 127787283
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Entry
127787283 CDS
T10632
Name
(RefSeq) chaperonin CPN60-2, mitochondrial-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127787283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dlt03019
]
127787283
03110 Chaperones and folding catalysts [BR:
dlt03110
]
127787283
03029 Mitochondrial biogenesis [BR:
dlt03029
]
127787283
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dlt04147
]
127787283
Enzymes [BR:
dlt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
127787283
Messenger RNA biogenesis [BR:
dlt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
127787283
Chaperones and folding catalysts [BR:
dlt03110
]
Heat shock proteins
HSP60 / Chaperonin
127787283
Mitochondrial biogenesis [BR:
dlt03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
127787283
Exosome [BR:
dlt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127787283
Exosomal proteins of other body fluids (saliva and urine)
127787283
Exosomal proteins of breast cancer cells
127787283
Exosomal proteins of colorectal cancer cells
127787283
Exosomal proteins of bladder cancer cells
127787283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CO_dh
Motif
Other DBs
NCBI-GeneID:
127787283
NCBI-ProteinID:
XP_052171211
LinkDB
All DBs
Position
12:complement(1969103..1978522)
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AA seq
575 aa
AA seq
DB search
MYRFVANLASRARGARNGTYQIGSRLAWSRNYAAKDVKFGVEARALMLRGVEELADAVKV
TMGPKGRNVVLEQSFGGPKVTKDGVTVAKSIEFKDRIKNVGASLVKQVANATNDVAGDGT
TCATILTHAIYSEGCKSVAAGMNAMDLRRGITMAVDAVVTNLKSRTKMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITIADGKTLHNELEVVEGMKLDRGFISPYFITNPK
TQKCELEDPLILIHEKKISSLNAVVKVLELALKRQRPLLIVSEDVESEALAALILNKLRA
GIKVCAIKAPGFGDTRKANLQDLAILTGGQVITDELGLDLEKVGLEMLGTCKKVSISKDD
TVVLDGAGDKKAIEERCEQLRTSIELSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKVLERLHTANFDQKIGVQIIQNALKA
PAYTIVSNAGVEGAVVVGKLLEQDNPELGYDAAKGEYVDMVRAGIIDPLKVIRTALIDAA
SVSSLLTTTEAVIVELPKDDKEAPAIGAGMGGMDY
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgcttcgttgccaatctagcctccagagcccggggcgctaggaacggtacttac
cagattggcagtaggttggcttggagcagaaactatgctgctaaagacgtcaaatttgga
gttgaagcgcgggctttgatgcttaggggcgttgaagagctcgccgacgctgtcaaagtg
acaatgggcccgaaaggccgcaatgttgtcttggaacaaagttttggtggcccaaaagtg
acaaaggatggtgttacagtggcaaaaagtattgagtttaaagacagaatcaagaatgtt
ggtgcgagtcttgtaaagcaggttgcaaacgctacgaatgatgttgctggtgatggtaca
acttgtgcaacaatacttacccatgcaatatattctgagggatgcaagtcagtagcagct
ggaatgaatgccatggacttgagacgtggtatcacaatggcagttgatgcagtggtgaca
aacttgaagagcagaacaaaaatgatcagcacatctgaagaaatagcccaggttggaaca
atatcagccaatggggagagagagattggtgaacttatagctaaagctatggagaaagtt
ggcaaagagggggttattaccattgctgatgggaaaacgttgcataatgaactggaagtg
gttgaaggaatgaagctggacagaggtttcatctcaccttatttcattacaaacccaaag
acccaaaaatgtgaactggaagatccactgatattaattcatgagaaaaaaatctcaagc
ttaaatgctgttgtgaaagtattggagttggccctgaagaggcaaagaccgttgctgatt
gtttctgaagatgtggaaagtgaagcactagcagctctcatcttgaacaagcttcgtgct
ggaatcaaggtttgtgccattaaagctcctggatttggagacaccaggaaggccaatctt
caagatcttgctattcttacaggaggccaggtcataactgatgaattgggtttggacctt
gaaaaggttggacttgaaatgcttggaacatgcaaaaaagttagcatatccaaggatgac
acggttgtccttgatggggctggtgacaagaaagccattgaggaaagatgtgaacagctg
agaacttcaattgaattaagcacttctgattatgacaaagagaagctacaagagagacta
gcaaaactttctggtggtgttgctgtattgaagattggaggtgccagcgaagctgaggtt
ggtgagaagaaagatagagttactgatgctttgaatgcaacgaaggcagctgtggaggaa
gggattgttcctggtggtggtgttgctcttctttatgcctcaaaggtgctggaaaggctt
cacactgcaaattttgatcaaaagattggcgtccagataattcagaatgctctaaaggcg
ccagcatatacaattgtttccaatgcaggagtcgagggggcagtagttgttggcaagcta
ttggaacaggataaccctgaactcggatatgatgcagctaaaggtgaatatgtagacatg
gttagggcaggaattattgatccactgaaggtcattagaacagcattgatagacgctgca
agcgtgtcatctctgttgactacaacagaagctgttatcgtggagctccccaaggatgac
aaggaagctccagcaattggagcaggaatgggtggcatggattattga
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