Diospyros lotus (date-plum): 127787389
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Entry
127787389 CDS
T10632
Name
(RefSeq) flap endonuclease GEN-like 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
dlt Diospyros lotus (date-plum)
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dlt03400
]
127787389
DNA repair and recombination proteins [BR:
dlt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
127787389
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
Chromo_2
DUF8160
RtcR
Motif
Other DBs
NCBI-GeneID:
127787389
NCBI-ProteinID:
XP_052171367
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Position
12:complement(36253906..36264459)
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AA seq
606 aa
AA seq
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MGVGGHFWDLLKPYSRSEGFDFLRNKRVAVDLSIWIVQHETAIRAYARNPNLRLTFFRTV
NLFSKFGAFPVFVVDGMASPLKSQARIARFFQLSGIDLSSSSVAEEGVSVERNWKFQKSI
QECVELLELLGMPILKAKGEAEALCGKLNSEGHVDACITADSDAFLFGAHCVVKLIRPNS
KEPFECYNMSDIEAGLGLKRKHLIAIALLVGNDHDLNGVQGIGLDTALRFVKSFREDEVL
IRLSEIGRGDRLQFQGGIRSVSDSLCSSDDSSPKPKSRHCSLCGHPGSKKAHLELACEYC
HPLTNEGCMPKPVGFKCDCTSCYLDRRDKELKKIKNWQFKVCQKIAMEENFPNVEIVELY
LNNQHDFSADDAGHLAWESPETEMLVDYLAFHQHWEPSYIRQKLLPMLSTIFLREMASNP
NGDLLYGQYEFHSIQRLKIRYGHQSFLVKWKKASPAANNTVPTAKSDEVQSDSSKLDEST
DSLDEADEPQIFLENDSWFLLTDENMELVEAAFPETVDAFLKEKELKEMKSRTKKSGETP
SELATPKGVQRSLTDFYRSSKALCQVKIPDGLAKNRHRGTTDSPDGKRKGSSPKLSKSVR
RRLLFE
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgggagggcacttctgggatttgctcaagccctacagccgatcggagggcttc
gatttcctgcgcaacaaacgcgtggccgtggatctctcgatctggatcgtccagcacgag
accgccatcagagcctacgcccgaaaccctaatctcaggctcacatttttccgcaccgtc
aatctcttctccaagttcggtgcattccctgtatttgtggttgatggaatggcatcacct
ttgaagtctcaggcaaggattgcacggttctttcagttatcaggaattgatttgtccagt
tcatcagtggcagaggagggtgtttcagttgaaaggaattggaaatttcaaaaaagtatt
caagagtgtgtggagctgcttgaacttcttgggatgcccattcttaaagcaaaaggggag
gctgaagcactttgtggcaagctaaacagtgaaggccatgtagatgcttgcattaccgca
gacagtgatgcgttcctctttggtgctcattgtgtagtaaaactcattcgccccaactcc
aaagaaccatttgaatgctacaatatgtcagatattgaagctggtcttgggttgaagaga
aagcacttgatagccatcgcccttttggttggaaatgaccatgatttaaatggcgtccaa
ggaattgggcttgatacagccctccgttttgtgaaatccttcagggaagatgaggttttg
attaggttaagtgaaattggcagaggagacagattgcagttccagggtggcattagatct
gtcagtgattctttgtgcagttcagatgatagctcgccaaaaccaaagtctcgtcattgt
tccttgtgtgggcatccaggcagcaagaaagctcatctcgagctggcttgtgaatattgt
catccccttacgaatgagggttgtatgccaaaacctgtggggttcaaatgtgattgcacc
tcatgttatttggatagaagggacaaggaactgaagaagatcaagaattggcagtttaaa
gtttgccaaaagattgctatggaagagaatttcccaaatgtcgagattgttgaattgtat
ttgaacaaccaacacgacttcagtgctgacgatgcgggccatttagcctgggaaagccca
gaaaccgaaatgctggtcgattacttagctttccatcagcactgggagccctcttacata
cggcaaaaattgcttccaatgctgtccaccattttcctcagagaaatggcctcaaacccg
aatggcgacttgttgtacggccagtatgagtttcactctatccagcggctgaagatcaga
tatggacatcaatctttcctagttaagtggaagaaagcttcacctgcagccaacaatacg
gttccaactgcaaagtcagatgaagtacaatccgattccagcaagcttgatgaatccacc
gattcattagatgaagccgatgaaccccagatatttctcgaaaatgactcatggtttttg
ctaactgatgaaaacatggagctcgtcgaggctgctttccctgaaacagtggatgcattt
ttgaaagagaaggagctgaaggaaatgaaatcacgaacaaagaagtctggagaaactcct
tccgagttggcaaccccgaaaggcgtgcagcgcagtcttactgacttttatcgatcatcg
aaagcattgtgtcaggtgaagatcccagatggtttagccaaaaaccggcatcggggtact
actgattctcctgatggaaaaagaaaaggttcgagtcctaaactttccaaatctgtgagg
cgtcgtcttctctttgagtaa
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