Diospyros lotus (date-plum): 127787951
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Entry
127787951 CDS
T10632
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03440
Homologous recombination
dlt03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127787951
03460 Fanconi anemia pathway
127787951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dlt04121
]
127787951
03036 Chromosome and associated proteins [BR:
dlt03036
]
127787951
03400 DNA repair and recombination proteins [BR:
dlt03400
]
127787951
Ubiquitin system [BR:
dlt04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
127787951
Chromosome and associated proteins [BR:
dlt03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
127787951
DNA repair and recombination proteins [BR:
dlt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
127787951
FA (Fanconi anemia) pathway
Downstream FA components
127787951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Tower
Motif
Other DBs
NCBI-GeneID:
127787951
NCBI-ProteinID:
XP_052172002
LinkDB
All DBs
Position
13:19393168..19401700
Genome browser
AA seq
1095 aa
AA seq
DB search
MSTWQIFSDADNNFRWEASDQRFNMEPKTPPESSPSLPSMADLLLQGCSNLMENRGGRFQ
TPPVFQSGVGKPVTVKHSSITKALSILGEEADAFASSGRQLCNRSDDGCSLSNSMFRTGS
GKKVNISSTGLVRANTLLGLEEGNDPTFSSLKDSKNLLVSDESLGWRKSSHPETREGVNT
RTYKDATATISNFNSKTSSLQRDLERETISGLMHTATKCPPIKFNTAGGRSISVSSDALQ
RARSLLGNLVGETFFNEEDENNPGPPYSKETRLANSNSSKENTQISPTCHQEIAKSMHVS
KSFVSPLRSYSSRIQSLITSENADSGTNLIKKFDAEDYDNTSKMPDNTLCQQRPPSGRSS
PHVIIRNSLQHDGSLINNPRGSSLGGPLVDISNKLGLHMDSKLTTGEKRRLGRSSISPFK
RPRNSRFVTPLNNVLPASSGLPSSAHGEPCGSRRVSAHYPFQGPRKYVKEYFEIPPFHLN
TKQLPDNIRRMNPENAEKYKFHNGCGLELGAEAFYHMLAESGASIQHASKEWVENHYKWI
VWKLACYERWYPSKSSGKLLTVPNVLEELKYRYEREVNHGHRSAIKRILEGDQPPSSMLI
LCISSICSKGAESGVATKVELTDGWYSIDGLLDVLLSKKLATGKLFTGQKLRIWGAGLSG
WVGPISPLKASNTVSLLLHINGTYRAHWADRLGLCKNVGTPLAFRCIKGMGGPVPRTLVG
VTRVYPVLYRERLSNGGFIVRSERMEARMIESYNQRRSVIAEGIASDFQREIKESCIIND
NDSEEGAKLLKILERTAEPEVLMAEMTSEQLTSFATYQAKLESIRQSDMQNSIEKALKDA
GLSARDITPFMRVRVVELTRKDCPTNCCPRKGLITIWNPTEKQQLELVEGKAYAVTGLIP
LALGTEADTLFLQARGSTTRWVPLSSSATQHIELFFTPRKSVSLSHLGEVPLSSEFDLAA
LVVYVGDVYSDALQKKQWVFVTDGSISESHSEEPSNSLLAISFWSPHTDCDSYTPINHNL
VGSVVGFCNLIKRAKDQVNHLWVAETTENSTYFLSSDLVHYFHLKDASASVERWAKISGL
TIEKLRRKVLTIVDK
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtggcagatattctccgacgccgacaacaacttccgatgggaggcctccgat
caacgtttcaacatggagccgaaaacgccgcccgaatcctctccttctctcccatccatg
gctgatctcttgcttcaaggatgttcgaatctgatggagaatcgcggaggtcgcttccaa
actcctccggtgttccaaagcggagtaggaaaaccagttacggtgaagcactcttccata
acaaaagcattatctattcttggcgaggaagctgatgcctttgctagttctggtagacaa
ttgtgtaatagaagtgatgatggatgcagtttatctaattcaatgttccgcacaggctct
gggaaaaaggttaatatatcttcaactggtcttgttcgagcaaatacattgttaggactg
gaagaaggtaatgatccaactttttcgagtctcaaggattcaaagaatctgttggtttct
gatgaatctttgggatggcgaaagtcatctcatcctgaaacaagagagggagtcaacacc
agaacttacaaggatgctacagccacaatttctaatttcaattctaagactagttcatta
caacgagatttagaaagggagactatttcaggtctcatgcatactgctactaagtgccct
ccaatcaagtttaatactgctggtgggagatctatatcagtttcaagtgacgctctgcaa
cgggcaaggagccttcttggtaacctggtaggagagactttctttaatgaagaggatgaa
aataatccaggtcccccatattccaaagaaaccagactggccaacagcaattctagtaaa
gaaaatacccaaatttctcccacttgccatcaagaaatagcaaaaagcatgcatgtatca
aagagttttgtgtctcctcttcggtcatattccagtcgaatccaatcattaattacatca
gagaatgcagattcaggtaccaacttgatcaagaaatttgatgcagaggactatgacaac
acttctaagatgcctgataacacactttgccagcaaaggcctccaagtggcaggtcttct
ccacatgtaataattagaaattctttacaacatgatggtagtttgataaataacccacga
ggaagttcattaggtggcccgttggttgatatttcaaataaacttggattgcatatggat
agcaaattaactactggtgagaagaggagacttggaaggagttcaatctctccattcaaa
aggccccgcaattccagatttgtcacccctctgaacaatgtcttgcctgcttctagtggg
ctacccagttctgcacatggagaaccctgtggcagcagaagagtttctgcccattaccct
ttccagggtccacgaaaatatgtgaaagaatactttgaaattccaccattccacctgaac
acgaaacaacttccagataatataagaaggatgaatccagaaaatgcagaaaaatacaag
tttcataatggatgtggtttagagctaggagcagaagctttctaccatatgttggctgag
tctggagcttctatacaacatgcttctaaagagtgggttgagaatcattacaagtggatt
gtttggaaacttgcatgttatgagagatggtatccctctaaatcttctgggaagttattg
acagttcctaatgtacttgaagaattaaaatacagatatgagagagaagtaaatcatggt
catcggtccgcaattaagagaattttagaaggagatcaaccaccttcttccatgttgata
ctgtgtatatcatctatttgttcaaagggtgcggaaagtggtgtggctacaaaagtagaa
ttaactgatgggtggtactcaattgatggtcttttagatgtattgctatcaaagaagttg
gctactggcaaactgtttactggccagaaactaaggatctggggagctggattatctggc
tgggttgggcctatttcacctctcaaggcatcaaacacggttagtcttcttctgcacatc
aatgggacatacagagctcattgggctgatcgtttggggttatgtaagaatgttggtact
ccattagcctttagatgcatcaagggcatgggcggtccagttcctagaacattagttgga
gtcacacgggtataccctgttctctacagggagaggttaagtaatggtggatttattgtg
agatcagagaggatggaagctagaatgatagagtcatacaaccagaggcgctcagtcatt
gcagagggaattgcatctgattttcaaagggaaataaaagaatcttgtattattaatgac
aatgatagtgaagaaggggctaaactattaaagatactggagagaactgctgaacctgaa
gtcttaatggcagagatgacttcagagcaattgacttcttttgctacttatcaagcaaaa
ttagagtcaattagacagtcagacatgcagaactcaattgagaaggctctcaaagatgca
ggcctaagtgcaagagacatcaccccatttatgagggtgagagtggttgagttaactcgt
aaagactgcccaacaaactgctgcccgcgaaaagggttaataacaatctggaacccgact
gagaagcagcaattagagctggttgaggggaaagcatatgctgtgacagggcttatacca
ttagcattaggcaccgaggctgatacccttttcttgcaagcaaggggatcgacgaccaga
tgggtgcctttatcttcttcagcaactcaacatattgagttgttcttcacacctcgcaaa
tcagtttcattgtcacatttgggtgaggttcctctgtcaagtgaatttgatcttgctgca
ttagttgtgtacgtgggagatgtatattcagatgctctccaaaagaagcagtgggtgttt
gtcacagatggctcaatatcagagtcacattcagaagagccatcaaattctttgcttgcc
atcagtttctggtctccacacacagattgtgattcatatactccaattaatcataacctt
gttggatcagtggttgggttctgtaatctcataaaaagagccaaagaccaagtcaatcat
ctctgggtggcagaaacaacagaaaattcaacctatttcttaagttctgatcttgtgcat
tattttcacttaaaagatgcttctgcttctgttgaaagatgggcaaagatctcaggcttg
acaattgagaagcttagacggaaggttttgaccattgttgataaatga
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