Diospyros lotus (date-plum): 127788154
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Entry
127788154 CDS
T10632
Name
(RefSeq) autophagy-related protein 13a isoform X1
KO
K08331
autophagy-related protein 13
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
127788154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dlt04131
]
127788154
03029 Mitochondrial biogenesis [BR:
dlt03029
]
127788154
Membrane trafficking [BR:
dlt04131
]
Autophagy
Autophagosome formation proteins
ULK complex
127788154
Atg1 complex
127788154
Mitochondrial biogenesis [BR:
dlt03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
127788154
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
127788154
NCBI-ProteinID:
XP_052172227
LinkDB
All DBs
Position
1:complement(52442847..52447648)
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AA seq
612 aa
AA seq
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MDLQDNSYGKHEQIVSQFLLKSLHIILHSRVPAFCSPGRGSDMLSGTPVKRSDKWFSLVL
GDRPAALDNLNFWHRNLVEPMIIDILLVQEVLGGSSENAPSALGLGDCVETVIERWVVQY
EYARTAFPLVGESSSYKKTYKKSIILLRSLYSMMRLLPAYKAFRKICSSSQHSDFAINYK
ISSFCVPFSREEESVTKQYDFHPVDTPQGRLSISVTYRESLSDFNLDTSTSFPLQIITDY
VGSPAADPFKAFASLEKGVSAASSPLRGVRPPSSPFQRPHSWTSGLHRISHAMPLGGSPP
IHRTSTASYDSPSPPTDVNVHRIQNYRVPTHHNSTSFHEYQLSPPFSPSPISSSPTYLLG
GNPIHTRGHSETAPVSIPHQVLGRSPKYLSPNLSDPNRSLLPPLSPRSTKLDPSSQDSSS
GIRLSRKLDLLRAGELSSGMINQYSGQKVSRDSKDESGRFSGVLSSSGSPRVGVSRSSSR
LSFQEDLDDCDFSCPFIVDDVDTLDSPDSQNLDGRKGTEFTSQAFSASRKYQDAAASALV
HILRSAPPLRQDSSCYSSLPSKMEPDGEVASASAMSMPRKTSDALEELKAYRELKDLLLS
KSGTLLVSKEET
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggatttgcaggataattcatatgggaaacacgaacagatagtctcacagtttcttttg
aaaagcttgcatattattttgcactctagggttcctgctttttgttcacctggtcgtggc
agtgatatgttgtctggtactccagtgaaaaggagtgacaagtggttcagcttggtgctt
ggagatcgtcctgctgctttagataacttgaatttttggcacagaaatttagtggaacca
atgataattgacatattacttgttcaggaagtcctgggtggttcatccgagaatgctcca
tctgcattgggattgggggattgtgttgagacagtaatagaaagatgggttgttcaatat
gagtatgctaggacagcgtttcctctagttggggaatcttcctcttacaagaaaacgtac
aagaaatcaattatacttttgcgttctctctattcaatgatgaggctccttccagcgtat
aaagcctttcggaagatatgctcatcaagtcagcattcggattttgctatcaactacaaa
atttcttcgttctgtgttccattttcacgggaggaggagtcagtgaccaaacaatatgat
ttccaccctgtagacaccccacaaggtcgcctttccatatctgtgacctatcgagagagt
ctgtctgatttcaatcttgacacttctacctcattcccactgcagataatcacagattat
gttggtagccctgccgctgatccttttaaggccttcgcttccctggagaagggtgttagt
gctgcatcttctccactgagaggggtaaggccaccttcttcgccatttcaacgtccacac
agctggacaagtggccttcataggatatctcatgcgatgcccctcggtggatctcctccc
atacatcgcacttccaccgcctcatatgattctccatccccacctactgatgtaaatgtt
cataggattcaaaattatagggtaccaactcatcataattcaaccagttttcatgagtac
cagctttcacctccattctcaccgtctcctatatcatcttccccaacataccttttaggg
ggtaaccctattcatacccgtgggcattcagagactgcccctgtgagtatcccacatcaa
gtgttgggcagaagtcctaaatacctttctcccaatttgtctgatccaaacagaagttta
cttccacctttatctcctagaagcacaaagctcgatccttcatcacaggattcctcatct
ggaatcaggttgtcaaggaaattagacttgttaagagctggggagttgagttctgggatg
ataaatcagtattctggccagaaggtttcaagagacagcaaagatgaatcaggtcgtttc
tcaggtgtgctatcctcaagtggctcaccacgtgttggagtctcaagaagctctagtaga
ttatctttccaggaagacttggatgattgtgacttctcatgcccttttattgtcgatgat
gttgatacattagattcccctgacagtcagaatcttgatggaagaaagggtacagagttt
acatcacaagctttttcagcgtctagaaaatatcaagatgctgctgccagtgcacttgtt
catattttgaggagtgcgccgcctctgcgccaagattcaagttgttactcgtcccttcct
tccaagatggaaccggatggagaagttgcttcagcttctgccatgtctatgccccggaag
acttcagatgccctggaggagctcaaggcgtacagagaattgaaagatttgctgctttcc
aaaagtggaactctcctggtgagcaaggaagaaacctaa
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