Diospyros lotus (date-plum): 127788351
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Entry
127788351 CDS
T10632
Name
(RefSeq) ATP-dependent DNA helicase At3g02060, chloroplastic isoform X1
Organism
dlt Diospyros lotus (date-plum)
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CarD_TRCF_RID
Cas3-like_C_2
TRCF
T1R_D3-like
DUF3198
RecG_dom3_C
Motif
Other DBs
NCBI-GeneID:
127788351
NCBI-ProteinID:
XP_052172476
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Position
13:134315..217130
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AA seq
883 aa
AA seq
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MVTGAVAVTTTSTTIKSFLSSHSISEPDIPPPAGAASVVFFRGVASSSSSSSSSSVFRLL
PPQFHRYPLRFPRPPPSHQHLIKKSTFCCSITKNALYTARGQSLSISRPTNLDLPPGRKE
NHDSQNHRDAISIVNDRIRRDHASKRDASRPPLMDSKEADRYIKLVKEQQQRGLQKLKAR
TNAADAGVRAGFSYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDAPKDSTEPIEYVFIEYA
DGMAKLPLKQASRSLYRYNLPNETKRPRTLSKVSDTSAWERRRIKGKVAIQKMVVDLMEL
YLHRLKQRRPPYPKSPAMAEFADQFPYEPTPDQKQAFIDVERDLTERETPMDRLICGDVG
FGKTEVALRAIFCVVLAGKQAMVLAPTIVLAKQHFDVISERFSKYPNIKVGLLSRFQTKA
EKEEYLQMIKHGHLNIIVGTHSLLGSRVVYNNLGVLVVDEEQRFGVKQKEKIASFKTSVD
VLTLSATPIPRTLYLALTGFRDASSLISTPPPERVPIRTHLSAYSKDKVISAIGYELDRG
GQVFYVLPRIKGLEQVMEFLQQSFPNTEIAIAHGKQYSKQLEETMEKFAQGEIKILICTN
IVESGLDIQNANTIIIQDVQQFGLAQLYQLRGRVGRADKEAHAHLFYPDKSLLSDQALER
LAALEECQDLGQGFQLAERDMGIRGFGNIFGEQQTGDVGNVGIDLFFEMLFESLSKVEEH
RVISVPYLSVQLDLNINTHLPSEYINYLENPMEIIHEAEKAAEKDIWSLMQFTENLRRQY
GKEPYSMEILLKKLYVRRMAADLGISRIFASGKMVGMKTNMTRKVFKLITDSMASDIHRN
SLSFEEDQIKAELLLELPREQLLNWIFQCLAELHASLPALIKY
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggttactggcgcagttgctgttactactactagtactactattaaatccttcctctcc
tcccactccatatccgagcctgatatcccccctcctgctggtgctgcttccgttgtcttc
tttcgaggagtcgcttcttcttcctcttcttcttcttcttcttctgtcttcagactcctc
cctcctcagttccatcgttatcctcttcgctttcctcgtcctccaccctctcatcagcat
ctcataaagaaatcgaccttttgttgttccattactaagaatgccctttacaccgcccga
ggccagagcctttctatctccaggcctaccaatttggatttgccccctggacggaaagaa
aatcacgactcgcaaaaccaccgcgatgccatatccattgtcaatgatcggatacgccgg
gatcacgccagcaagagagatgcttcgagacctcccctcatggactccaaggaggcggat
agatatattaaattagtaaaggagcagcagcagaggggtttgcagaaattgaaggcccgt
acgaacgctgccgatgccggtgttagagctgggtttagctacaaggtcgatccctacact
ctccgctccggggattatgtcgtccacaagaaggtgggaattggacgatttgtagggatt
aagttcgacgctcccaaagactccactgagccgattgagtacgtcttcattgagtatgcc
gacggaatggccaagcttcctcttaagcaagcctctcgctcgctctatcgatacaacctc
cccaatgagactaaaaggccacggaccttgagcaaagtaagtgatactagtgcatgggag
aggagaaggataaaagggaaggttgccattcagaaaatggttgttgacttgatggaattg
tatctgcataggctaaagcaaagaaggcctccttacccaaagagtcctgccatggctgaa
tttgcagatcaatttccttatgagcctacaccagatcaaaagcaggctttcattgatgtt
gagagggatttgacagagagggaaactccaatggacagattaatttgtggagacgtaggg
tttggtaaaactgaagttgcactgcgtgctatattttgtgtggtcctagcggggaaacaa
gctatggtacttgcaccgacaattgttttagcaaagcaacattttgatgttatttcagag
cgcttttcaaagtatcccaatatcaaggttggactcttgagcaggtttcagaccaaagca
gaaaaagaggagtatctgcaaatgatcaaacatgggcatttgaacattattgttggaact
cactcgcttctcggtagtcgtgttgtgtacaataatctaggtgtccttgtggttgatgag
gaacagaggtttggtgtcaaacagaaggagaagattgcttcatttaaaacttcagttgat
gttctcactctttctgcaacacctataccaagaaccctatatttagcattgactgggttt
cgagatgccagcagtttaatttcaacaccacctccagaaagagttcctataagaacccat
ctttcggcatacagtaaagacaaggtaatatcagcaattgggtatgagctggaccgtggt
ggccaggttttctatgttttgcctcgtataaaaggacttgaacaagtgatggagtttctt
caacaatcatttccaaatactgaaattgctattgctcatgggaagcaatattcaaagcag
cttgaagaaaccatggaaaaatttgcacaaggagaaattaagattctcatatgcacaaac
atagtagaaagtgggcttgacatccaaaatgcaaataccatcataattcaggatgttcaa
caatttggccttgcacaattgtatcagttgcgtggaagagtggggagggcggataaggaa
gctcatgcgcacttgttttaccctgataagtctctgctttccgatcaagcactggagagg
cttgctgctcttgaagagtgtcaggatcttggacaaggcttccaacttgcagaaagggac
atgggaattcgaggatttggtaatatttttggtgagcaacagacaggggatgttggaaat
gtaggcattgatctcttctttgaaatgctctttgagagcttgtcaaaggtcgaagaacac
cgtgttatttcagttccttatctatctgtacagctggatttgaacataaacactcatctc
ccttctgagtacataaactacttggagaatcccatggaaataattcatgaagctgaaaag
gctgctgaaaaagacatatggagtttgatgcaatttacagagaatctgcgacgtcaatat
gggaaagaaccttactccatggaaattctattgaaaaagctttacgtcagaagaatggct
gcagatctaggtatttcaaggatctttgcttcaggaaagatggttggcatgaaaacaaac
atgactagaaaggttttcaagctcataacagattccatggcatctgacattcaccggaat
tctctgagttttgaggaggaccaaattaaggctgaacttctactagaactgccaagagaa
cagctgctcaattggatcttccaatgcttagctgaacttcatgcttcactaccggccctt
ataaaatactag
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