Diospyros lotus (date-plum): 127788367
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Entry
127788367 CDS
T10632
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127788367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dlt03036
]
127788367
Chromosome and associated proteins [BR:
dlt03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
127788367
SWR1 complex
127788367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Myb_DNA-bind_6
Myb_DNA-binding
DBINO
Motif
Other DBs
NCBI-GeneID:
127788367
NCBI-ProteinID:
XP_052172510
LinkDB
All DBs
Position
13:39304588..39328429
Genome browser
AA seq
2045 aa
AA seq
DB search
MASKGPRSKLDHETRARKQKALEAPKEPRRPKTHWDHVLDEMVWLSKDFESERKWKLAQA
KKVAIRASKGMLDQATRGEKKVKEEEQRLRKVALNISKDVKKFWTKIEKLVLYKHQLDLD
EKKKKTLDKQLEFLLGQTERYSTMLAENLVNSPISHKLVHSKTVAHEQLSIQYKERDGGS
NVDSQSDVADIDQDFDVQSEDELEDDEHTLEEDEALITEEERKAELLALRNEVDLPLEEL
LKRYTMEEDARENSPELIAEAAKPTEAGEGDSEAGKGDGTSVLDINKSDSLALPGRRSGK
INGSISSENHFSESEEHQIGSSQELDRRQVPYDFHDEQDDGDFVLATGEEKLCALDDETT
LSEEEELAKAESNEAIDEVALLQKESEIPLEELLARYKKEHDIDECELDDSESLHGSDSV
DLSDAPAEEDLEPKQQHALIEEHDKPSDFSREGLEPKIIVEEGRESENKIADAAAAARSA
QPTGNTFSTTKVRTKFPFLLKYPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTI
ALLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKVKRQGWMK
PNSFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLT
GTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLR
PFILRRLKRDVEKQLPMKHEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISII
MQLRKVCNHPDLFEGRPIVSSFDMNGIDIPLSSLVCSMLTSSQFSSVDLSGFGFLFTHLD
FRMTSWESEEVQVIATPSSLIEGRADLVNVDENGPGFMHQKKLLGTNIFEEVRKALLEER
SQQVKERAASIAWWNSLRCRKKPMYSTTLQALVTIRHPVYEIQGNPSSNLNSSILADIVL
SPVERFKKMIDQVESFMFAIPAARAPAPVCWCSKNGTPVFLQPTFKEKCTKILSPLLMPL
RPAIVRRQLYFPDRRLIQFDCGKLQELAFLLRRLKSEGHRALIFTQMTKMLDILEAFINL
YGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWN
PAMDQQAQDRCHRIGQTREVHIYRLISQSTIEENILKKANQKRALDDLVIQSGGYNTEFF
KKLDPMELFSGHQTVPVRNIQKEKNCANGADVSVSNDDVEAALKHAEDEADYMALKKVEQ
EEEVDNQEFTEEAIGRLEDDEFINEDDTKVDESTDPHTLILTSNQENVAMLNESDVNEER
ALTFVAKEDDVDMLADVKQMAEAAAASGQAILSFENQLRPIDRYAIRFLEVWDPIIDKTE
MESEVRFEETEWELDRIEKLKEDMEAEIDDDEEPFVYERWDADFATEVYRQQVEALAQHQ
LLEELECEAKEKEQAEYGNSDSIKNDGYAVSKTKSKKKLKKAKFKSLKKGALASESKDGK
ELHSNETMAMHDGNGSLEVTTSSKTVLPHSTVEKKRKSAPDCDEQKSIKKSKKFKRATEI
STVDPDSDMFSKQLDEQKDSKLCESIVDLDQKPISKSKMNGKIYITSMPVKRVMTIKQPE
KFKKKGNIWSRDTFPSPDFWLPQEDAILCALVHEYGPNWSLVSETLYGMPAGGFYRGRYR
HPVHCCERFRELIQKYVLFAADNPNNEKGGNAGSGKGPLRVTEDNIRVLLDVATELPDNE
LLLQKHFFALLTSVWRMTSRIDRHQGLSSSRNGFYPVGRHFTSRVSQIGSMREPSEKMAF
TNLLQSSKLVAAALSDADSAQCDDRALILNPREEASVVADQLEITLEPQTGGSDPMIPLP
LVINLSIWETDPPPYPCMPAGAEQHLRSSQSMAENRFRNASIACSEGSLGWASSAFPTGD
GRYRMASKSQTLGKHKLSMCESVKPSKSKTRKTTIESNEMHGLVADPAVQRKLTAPGTSS
MRFDPLPVINDYGIDAFDSSSPCDINEISVPSETHTSDLVPHNYIPGFFSGLDDCSSLPD
FMDIG
NT seq
6138 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaaaggtccaaggtctaagcttgatcatgaaacaagggccaggaaacaaaag
gcacttgaagctcctaaagagcctcgacgccctaaaactcattgggatcatgttttagac
gagatggtttggttgtcaaaggactttgagtcggagagaaaatggaaattggctcaggca
aagaaagtagctataagagccagcaaagggatgttggatcaagccacaaggggagaaaag
aaagtgaaggaagaggaacaaagattgagaaaagttgctctcaatatttcgaaggatgtg
aagaaattctggacgaaaattgaaaagctggttctatacaaacatcaacttgacctagac
gagaaaaagaaaaaaacattggataaacagcttgaatttcttctgggccaaacagaaagg
tactcaaccatgttagcagaaaaccttgtaaactcaccaatttctcacaagctggtacat
tcaaaaaccgttgctcatgaacaactgagtattcaatacaaagaaagagatggaggatcc
aatgttgattctcaatcagatgtggcagacatcgatcaagattttgatgtacagtccgaa
gatgaattggaagatgacgaacataccctggaggaagatgaggctcttataactgaagaa
gagaggaaagcagaattattagctctgcgtaatgaagtagatctacctcttgaagagctt
ctcaaacgttacacaatggaggaagatgccagagaaaatagcccagaattgattgcagaa
gctgctaagcccactgaggcaggtgaaggtgacagtgaggcaggtaaaggtgatggtact
tcggtcctggatattaataagagtgacagtcttgcacttcctggtcgtcgttctggtaaa
attaatggtagcatatcatcagaaaatcatttttccgaaagtgaggaacaccaaattgga
agttctcaagagttggacagaaggcaagtgccgtacgacttccatgatgaacaggatgat
ggtgattttgttcttgcaactggagaagaaaagctatgtgctttggatgacgagactact
ttgtcagaggaagaagaactagcaaaggctgaatcaaatgaggccatagatgaggttgca
ttactgcagaaagagagtgagatccctctggaagagttgcttgcaaggtataaaaaggaa
catgatattgatgaatgtgaactggatgactctgagtccttgcatggttcagattctgtg
gatctgtcagatgctccagcagaggaagatcttgaaccaaagcagcaacatgctcttatt
gaggaacatgacaaacctagtgacttttcacgagaggggttagaaccaaagataatagtg
gaagaaggaagagagagtgagaataaaattgccgatgcagctgctgctgcaagatctgcg
cagccaactggcaacacattctcaacaaccaaagtgcgtacaaagtttccttttcttctc
aagtaccctcttcgtgaatatcagcatattggtttggactggcttgttaccatgtatgag
aagaggcttaatgggattctggctgatgaaatggggcttggaaagactattatgacaatt
gctcttctagctcatcttgcatgtgaaaagggtatttggggcccacacctcattgttgtc
ccaaccagtgtcatgctcaactgggaaactgagtttctcaaatggtgtcctgcttttaaa
atattaacatattttggaagtgccaaagagcgaaaagttaagaggcagggatggatgaaa
cctaattctttccatgtatgcataacaacttacagacttgttatacaggattctaaagtt
tttaagcggaaaaagtggaaatacttgattttggatgaagctcatctgataaaaaactgg
aagtcccagagatggcaaactcttcttaatttcaattcaaaaaggcgtattcttttaact
ggtactccactgcagaatgatcttatggaactctggtctctgatgcatttcttgatgcca
cacatttttcagtctcaccaagaatttaaagattggttctgtaatccgatatctggaatg
gtagagggtcaagaaaaagtaaacaaggaagttgttgaccgcttgcataatgtcctccgc
ccatttatcctccggcgactgaaaagagatgtggagaagcaactacctatgaagcatgag
catgtaatttactgcaggctctcaaagagacagcgtaacctatatgaagattttattgct
agctcagagacacaggctactttggcaagtgccaatttttttggaatgatcagcatcata
atgcaacttcgcaaagtgtgtaatcaccctgatttatttgaaggacgaccaattgttagt
tcttttgatatgaatggcattgatatcccattgagttccttagtttgctcaatgcttaca
tcaagccagttctcttctgttgatctcagtggttttggatttttatttacccatttagat
tttaggatgacttcttgggagagtgaggaagtccaagttattgctactccatcaagctta
attgaggggcgtgctgaccttgttaatgtagatgaaaatggccctgggttcatgcatcag
aagaagttgcttggaacaaacatctttgaagaggtcaggaaagcacttttggaggaaagg
tcacaacaagtaaaggaaagggcagcatctattgcatggtggaactccttaaggtgcaga
aaaaaaccaatgtactcaacaactctgcaggctcttgtaactataagacatcctgtttat
gaaattcaaggaaacccttcatccaacttgaactcttcaatccttgctgatattgtactg
tcaccagttgaacgcttcaagaaaatgattgatcaggttgaatccttcatgtttgcaatt
ccagctgcacgggcaccagctcctgtttgctggtgcagtaaaaatggaactcctgtgttt
ctgcaacccacctttaaggagaagtgcactaaaattttgtcaccccttctaatgcctctg
cgccctgcaattgtccgaaggcaactatattttccggacaggcgactcatacaatttgac
tgtggtaagttgcaagagcttgcttttctgcttaggcgattgaagtcagaaggtcatcgg
gcactaatattcacccaaatgacgaagatgcttgatatcttggaggccttcataaattta
tatggttatacttacatgcgtttagatggatccactcaaccagaagagaggcaaacattg
atgcagcggtttaatacaaacccaaagattttcctttttatattgtctacacgcagtggg
ggtgttggtatcaaccttgttggggctgatactgttatcttttatgacagtgattggaat
cctgccatggatcaacaagcacaagatcgatgccacagaataggacagacacgtgaagtg
cacatatatcggttaatcagtcagagcactatcgaagagaatattttgaaaaaggcaaat
caaaagcgtgcccttgatgatttggttatacaaagtggtggctacaacactgaattcttc
aagaaactggatcccatggaattgttttcaggccatcaaactgttcctgtgaggaacatt
cagaaagagaaaaattgcgcaaatggagctgatgtttctgtatctaatgatgatgtggag
gcagctctgaagcatgcagaagatgaagcagactacatggctttgaagaaagttgaacag
gaagaggaggtggataatcaggagtttacagaggaagctattgggaggttggaagatgat
gagtttataaatgaggatgatacaaaggttgatgagtctactgatcctcataccttgatt
ttgacctcaaaccaagaaaatgtggcaatgttaaatgaaagtgatgtcaatgaagaaaga
gctctgacttttgtggccaaagaagatgatgttgacatgctagctgatgtcaaacagatg
gctgaagcagctgcagcatctgggcaagcaatcttgtcctttgagaaccagttgcgtcca
attgaccgttatgccatacgttttctggaagtgtgggaccctataatagataagacagaa
atggaatcagaagttaggtttgaggaaactgagtgggagctggaccgcatagagaagtta
aaggaggatatggaagcagagattgatgatgatgaagaaccatttgtctatgaaagatgg
gatgctgattttgcaactgaggtatatagacagcaagttgaggctttggcccaacatcag
ctgttggaagaactggaatgcgaagccaaagagaaagaacaagcagaatatggaaattct
gattctataaagaatgatggctatgctgtttctaaaaccaagtcgaagaagaaactgaag
aaagccaagttcaaatctctaaagaaaggagctttagcttcagaatcaaaagatgggaag
gaattacattcaaatgaaactatggccatgcatgatgggaatggctctcttgaagtgact
acctcttcaaaaacagtattaccgcattcaactgtggagaagaaacgtaaatcagcacca
gactgtgatgaacagaagagcattaaaaagtccaagaaattcaaaagggctactgaaata
agtactgttgatccagattcagacatgtttagtaagcagcttgatgaacaaaaggattca
aaattatgtgagagtattgttgatcttgaccagaagccaataagcaagagcaagatgaac
ggaaaaatctacatcacttctatgcctgtaaagcgggtgatgacaataaaacaaccagag
aagttcaaaaagaagggcaatatctggtcaagagatacttttccctcaccagatttttgg
ttgcctcaggaggatgcaattttgtgtgctcttgtacatgaatatggccccaattggagt
ttggtgagtgaaactttgtatgggatgccagctgggggcttttataggggaaggtatcgc
catcctgtccactgttgtgagaggtttagggaactcatccaaaaatatgtcttgtttgca
gcagacaatcctaacaacgagaaaggtggtaatgctggctctggaaagggtcctctcaga
gtgacagaggataatattcgggttctgttggatgttgccactgaactgccggataatgag
ttgctccttcagaagcacttctttgcgctgcttacttcagtctggaggatgacatcccgc
attgaccgccatcaaggtctctcgtcgtctcgaaatggcttctatcctgttggaagacat
ttcacttccagggtcagccagattggttccatgagggagccatcagaaaagatggcattc
actaatttacttcaaagtagcaagttggtagcagctgcactctctgatgctgacagtgct
caatgtgatgatagagccttaatattgaatcccagggaagaagcttcagttgttgcggac
cagttggagataacccttgagcctcagacaggagggagtgaccctatgatacctttacca
ttggtcataaatctctcgatatgggaaacagatccacctccatatccctgcatgccagca
ggagcagagcaacatcttaggtcctcacaaagtatggctgagaatcgttttaggaatgca
tcaattgcttgtagtgaaggttcattgggttgggcttcatcagccttcccaacaggcgat
ggcaggtaccggatggcatcaaaatcacagacgttggggaaacacaagctatccatgtgc
gagtcagtgaagccttccaaatccaaaacaaggaaaactacaatagagtcaaatgaaatg
catggcctggttgctgatccagcagtccaacgaaaactaactgctcctggcacttccagt
atgaggtttgatcctctgcctgtcattaatgattatggaattgatgcttttgacagcagt
tccccctgcgacatcaatgagatctccgtcccttcagagacacatacttcagacctggtc
ccgcataactatattccagggttcttctcagggcttgatgactgttcatctttgcctgat
tttatggacatagggtag
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integrated database retrieval system
