Diospyros lotus (date-plum): 127788389
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Entry
127788389 CDS
T10632
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127788389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dlt03019
]
127788389
03009 Ribosome biogenesis [BR:
dlt03009
]
127788389
04131 Membrane trafficking [BR:
dlt04131
]
127788389
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dlt04147
]
127788389
Messenger RNA biogenesis [BR:
dlt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
127788389
Ribosome biogenesis [BR:
dlt03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
127788389
Membrane trafficking [BR:
dlt04131
]
SNARE
SNARE associated proteins
Others
127788389
Autophagy
Aggrephagy
Other aggrephagy associated proteins
127788389
Exosome [BR:
dlt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127788389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_33
CDC48_2
AAA_2
AAA_22
AAA_5
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_17
AAA_28
Mg_chelatase
ATPase_2
AAA_18
Parvo_NS1
Vps4_C
Viral_helicase1
IstB_IS21
ABC_tran
NACHT
AAA_7
NB-ARC
AAA_lid_PRS2_C
AAA_24
TsaE
DUF815
Zeta_toxin
Zot
Motif
Other DBs
NCBI-GeneID:
127788389
NCBI-ProteinID:
XP_052172539
LinkDB
All DBs
Position
13:6260939..6266301
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AA seq
809 aa
AA seq
DB search
MSIPAESSDCKGTKRDFSTAILERKKAPNRLIVDEATNDDNSVVALHPETMEKLQLFRGD
TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVLQCPDVKYGKKVH
ILPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCV
VAPDTEIFCEGEPVRREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSEDVDLERISKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDESIDAEILNSMAVTNEHFQTALGTSNPSALRETVVEVPNVNW
EDVGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQI
FKACLRKSPVAKDVDLGVLAKYTQGFSGADITEICQRACKYAIRENIEKDIEREKRRGGN
QEAMEEDVQDDDDEVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGAEFR
FSETSAGAAASSDPFAASAGGADEDDLYS
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgagtattccggctgaatcgtccgactgcaaggggacgaaaagggacttcagcactgcg
attcttgagcggaagaaagcccccaatcggctcattgttgacgaagcgaccaacgatgac
aactccgtcgtcgcccttcacccggagactatggagaagcttcagcttttccgcggtgac
accattttgatcaagggcaagaaaagaaaagataccatctgcattgcccttgctgatgac
acttgtgatgaaccaaagattaggatgaacaaggttgttagatctaatcttagggtcaga
cttggtgatgtggtttctgtgctccaatgtcctgatgtcaaatatggtaaaaaagtccat
attcttcctgtggatgacactgttgaaggagtcactggaaatttgtttgatgcctacttg
aagccttatttcctggaagcataccgccctgtgaggaagggtgacctctttcttgtgagg
ggtggaatgagaagtgtagaatttaaggttattgagactgatcccgcagaatattgtgtg
gttgcccctgacacagagatcttttgcgaaggagagcctgtgagaagggaggacgaggat
aggttggatgaggttggttatgatgatgttggtggagttcgtaaacaaatggcacaaatt
cgggaacttgtggagcttcctttgaggcatcctcaactctttaagtcaattggtgtcaag
ccacccaaagggattttgctatatgggccacctggatctggaaagactctaatagcgcgg
gctgttgctaatgaaactggtgctttctttttctgtattaatggaccagagattatgtca
aaattggctggagagagtgaaagtaatctcaggaaagcattcgaggaggctgagaagaat
gcaccttccattatcttcattgatgagattgattcaattgctcccaaacgagagaaaact
aatggagaagttgaaaggagaattgtttctcagctcttaacgctaatggatggacttaaa
tcccgtgcccatgtcattgttattggtgccacaaaccgtcctaacagcattgatcctgca
ttgagaaggtttggtagatttgatcgggaaatagatatcggtgttccagatgaggttggc
cgccttgaggttcttcggatccatacaaagaacatgaagctctctgaagatgttgatcta
gagagaatttcaaaggatacacatggttatgttggtgctgatctagcagctctgtgcact
gaagctgcacttcaatgcatcagagagaagatggatgtgattgacttggaagatgaatct
atagatgcagagatactcaactctatggctgttacaaatgagcacttccagactgctctt
ggaacaagcaacccttctgctctccgtgaaactgttgttgaagttcctaatgtcaattgg
gaagatgttggaggcctcgagaacgttaagagagagcttcaagagactgttcaatatcct
gtggaacatccagagaagttcgagaagtttggtatgtcaccctcaaagggagttcttttc
tatggtccacctggatgtggaaaaactttgctggccaaagccattgctaatgaatgtcag
gcaaacttcattagcgtcaagggtccagaattgcttactatgtggtttggagaaagtgag
gccaatgtcagggaaatatttgacaaggctcgccaatctgctccctgcgtccttttcttt
gatgaactcgactcaattgccacccagagaggaagcagcgtcggagatgccgggggtgca
gctgacagggtgttgaatcaacttcttacagaaatggatggaatgtcagcaaagaaaaca
gttttcatcattggggcaaccaacagaccagacataattgaccctgcactcttgcgccct
ggccgtcttgatcagttaatttacatccctctgcctgacgaggaatctcgcctgcagatt
ttcaaggcctgtctaaggaaatctcctgttgcaaaagatgttgaccttggagtccttgct
aagtacacccagggcttcagtggtgctgacattacagaaatatgccaaagagcgtgcaaa
tatgccattcgggagaatattgagaaggatattgagagggaaaagaggagaggggggaac
caggaggccatggaagaggatgttcaggatgatgatgatgaggtagcagagatcaaggcc
gcccactttgaggagtcaatgaagtatgctcgtcggagtgtgagcgacgcggacattcgc
aagtaccaggcatttgctcagacactgcaacagtcgagagggttcggggccgaattccga
ttctccgagaccagtgccggagcggctgcctcgtcggacccatttgcagcatctgcgggt
ggggctgatgaagatgatttgtatagttag
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