Diospyros lotus (date-plum): 127788394
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Entry
127788394 CDS
T10632
Name
(RefSeq) threonine--tRNA ligase, mitochondrial 1
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
127788394
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dlt01007
]
127788394
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dlt03016
]
127788394
Enzymes [BR:
dlt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
127788394
Amino acid related enzymes [BR:
dlt01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
127788394
Transfer RNA biogenesis [BR:
dlt03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
127788394
Prokaryotic type
127788394
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
127788394
NCBI-ProteinID:
XP_052172545
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All DBs
Position
13:2089932..2120676
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AA seq
724 aa
AA seq
DB search
MLCSQVWWRLSSPLRSPSPLNATLRLYSSLFSPSAMGKKVNALPDSGPDHPKDEAYLQSI
IPKRIALFESIKAQQLAHLQSISGDPIKITLPDGTVKDGKKWASTPLDIAKEISKSLAAN
SLISKVNGVLWDMSRPLEGDCELKLFTFDSDEGRDTLWHSSAHILGQSLEMQYGCKLCIG
PCTTRGEGFYYDAFYGDLGLNEDHFKRIDSGAAKAVGEKQPFERIEVTRQQALEIFSENK
FKIEIINELPEDKTITVYRCGPLVDLCRGPHIPNTSFVKALACLKASSAYWRGNKDRESL
QRVYGISFPDQKRLKEYLVRLEELKKYDHRELGKNQELFFFHPLSPGSCVFLPYGARIYN
KLVEFIRGQYWKRGYQEVVTPNIYNMQLWETSGHAANYRENMFLLEIEKQEFGLKPMNCP
GHCLIFDHRVRSYRELPLRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCRESQIKD
EVKSALEFINHTYEIFGFTFDLKLSTRPEKYLGDLPTWEKAEAALAEALNEFGKPWEINE
ADGAFYGPKIDISVSDALNRKFQCATLQLDFQLPSRFNLSYSAEDEAKKERPVMIHRAIL
GSVERMLAILLEHYKGKWPFWLSPRQAIVCPVSEKSESYAMQVKDQIHEAGFYVDVDTTD
RTIQKKVREAQLAQYNFILVVGEEEMKTGQVSLRVRDVKDKADISVMSVENLLKFFRDEA
AAFR
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgctatgttctcaagtctggtggcggttatcgtcccctctccgctctccttcgccgctt
aacgctacgctccgtctatactcgtcgttgttttcgccttcagcgatgggcaaaaaggtc
aatgccctgccggactccggccccgaccacccaaaggatgaggcctatctccaatccatc
attcccaaacgcatcgcgctctttgagtccatcaaggctcagcaactcgctcacctccaa
tccatttccggcgatccgatcaagataactctgccggacgggaccgtgaaggacggtaag
aaatgggcgtcgactccgctggatatcgcgaaagagatttccaagagtttggcggcaaat
tcgctgatttcgaaggtcaatggagtgctttgggacatgtcgaggccgcttgaaggtgac
tgcgagctcaaattattcacttttgacagtgatgaaggccgcgacaccttgtggcactcg
agcgctcacattcttgggcagtcactggagatgcaatacgggtgcaagttgtgcattggg
ccgtgtactacacgaggggagggattctattatgatgccttttatggtgacctgggttta
aacgaggatcacttcaaaaggattgattctggggcagcaaaagctgttggggaaaaacaa
ccttttgagcgcattgaagttacaaggcagcaggctctggagattttctctgaaaataaa
ttcaagattgaaatcattaatgaattgcctgaagacaaaactatcacagtatatagatgt
ggtccattggtagatttgtgccgtgggccccatataccaaatacatcttttgtaaaagca
ttggcttgcttaaaggcttcatcagcatattggaggggaaataaagatcgtgaaagttta
caaagagtgtatgggatatcatttcctgatcaaaaacgattgaaggagtaccttgtcaga
cttgaagagttaaagaaatatgaccacagagagcttggaaagaatcaggaacttttcttt
tttcacccacttagtccgggaagctgtgtcttccttccatatggtgctcgtatatacaac
aaattggtggaatttatacgaggtcaatactggaagagaggataccaagaggttgtgaca
ccaaatatctacaacatgcaactctgggaaacatctggtcatgctgcaaactatagggag
aatatgttcttattggagattgaaaagcaagagtttggacttaagccaatgaactgccca
gggcactgtttaatatttgatcatagagttcgctcatacagggagcttcctcttcgcctt
gctgattttggggttttacatcggaatgaggcaagtggtgcacttagtgggttaactcgt
gtcaggagatttcagcaggatgatgctcacatcttctgcagggagtctcagataaaagat
gaagtcaagagtgcattagaattcatcaatcacacctacgagatatttggattcactttt
gacttgaagctgtcaacgaggccagagaaatatcttggagacttaccgacatgggagaaa
gcggaggcagctcttgcggaagcattgaatgaatttgggaaaccctgggagataaatgaa
gctgacggagcattttatgggccaaaaattgatattagtgtttctgatgcactgaatagg
aaattccaatgtgcaactttacagttggacttccaacttccttctcgtttcaatttatca
tactcggcagaagatgaagctaagaaggagagacctgttatgatacacagagctattcta
ggttctgttgagcgtatgcttgctatacttttggagcattataagggcaaatggcctttc
tggcttagtccacgtcaagcaattgtgtgccctgtttcagagaaatcagagtcatatgca
atgcaggtaaaggaccagatccatgaagctggtttttatgttgatgttgatacaactgac
agaacaattcagaaaaaggtacgagaagcgcagttagcacaatacaatttcatattagtc
gttggcgaggaggaaatgaaaacgggacaggtaagcttgcgagtgagagacgtgaaagac
aaagcagatatctcagtcatgagtgtcgaaaacctgctcaaattcttcagggatgaagct
gcagctttccggtag
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