Diospyros lotus (date-plum): 127788398
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Entry
127788398 CDS
T10632
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
dlt Diospyros lotus (date-plum)
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dlt04131
]
127788398
04121 Ubiquitin system [BR:
dlt04121
]
127788398
Enzymes [BR:
dlt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127788398
Membrane trafficking [BR:
dlt04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
127788398
Ubiquitin system [BR:
dlt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127788398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
Zn_ribbon_19
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
zf-RING_16
Prok-RING_4
zf-Nse
crAss001_48
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
127788398
NCBI-ProteinID:
XP_052172558
LinkDB
All DBs
Position
13:complement(34185327..34199688)
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AA seq
290 aa
AA seq
DB search
MSNGRTHWCYSCRQPVSLRGQNAVCADCCGGFIQELGDILSTNSLSIDSGEENGIEDHQQ
QPRLMDAFLNFLRERIVGINRSVDNSGRSDSHPEHGGIGPWLIFSGQMPQDSRFEELFNE
AGGFRQTSGGNYFVGPGLEELIDELTIDQRVVPPAPKSLIDEMPTVKVSQRHLRSDTHCA
VCKEKFKLGTQARKMPCNHIYHSDCIVPWLVQHNSCPVCRQELTLQRSNSECSDESWRAH
GRSSSSGRRNVHGTGRSRGSWNPLSFIRSLRSSRSRARNNRAVGSSSSTT
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatggcagaacccattggtgctatagctgtaggcaaccggttagtctgcgagga
caaaatgcagtttgtgccgactgttgtggaggatttattcaggaacttggtgatatactg
agcacgaacagcttgtccatagattctggtgaagagaatggcattgaagatcaccagcag
cagcccagattaatggatgctttcttgaactttctgagagagcgaatagtgggaattaac
aggagcgttgacaatagtggcaggtcagattcacatcctgaacatggtggtattggtcct
tggttgatcttcagtggacagatgcctcaggacagtaggtttgaagagcttttcaatgag
gccgggggatttaggcaaacaagtggcgggaattatttcgttggtcctggactagaagaa
ctaattgatgagcttactattgatcaaagggttgtaccccctgcacccaaatctttgatc
gatgagatgcctacggttaaagtatcacagagacaccttcgctctgacacgcactgtgcc
gtttgtaaagaaaaattcaagttagggactcaagcaaggaaaatgccgtgtaaccatata
taccattcagattgtattgttccttggctagttcagcataactcctgtcccgtttgccgg
caggaattaacattgcagaggtctaacagcgagtgtagcgacgagagctggagggctcat
ggtagaagcagctcaagtggccggaggaatgtacatggaacgggtagaagtcgaggatcg
tggaacccgctctctttcatccggtctcttagatcgtcccgatcccgagctcgaaataat
agagcagttggcagcagctcgtcaaccacatga
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