Diospyros lotus (date-plum): 127788557
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Entry
127788557 CDS
T10632
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic isoform X1
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
127788557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dlt03400
]
127788557
Enzymes [BR:
dlt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
127788557
DNA repair and recombination proteins [BR:
dlt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
127788557
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
SAP
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
127788557
NCBI-ProteinID:
XP_052172948
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Position
13
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AA seq
556 aa
AA seq
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MTQILKLGFQNFSICTRKTDAKNLFCVSFPLLIESFAVVPRDLGLRALVFVKARDLGSKQ
LCWYSASPAELSESMDINPEIRKAVVRGSRARARKIETENFEIDMDTAERMTVRELREKL
RSIGVPTRGGKRDLLSALEAFLNNREDEKQQSSVMKTICPEKSLSKRKGKRLSSEDQIQE
ANTVLEGSGLKCYKRRVKQVKVEVNIQEVKTTLVKAKQKQPMKTNEVSDKESSQLKKTAS
LEIASTVVEPSGEASLSVNQNEPWTIFAHKKPQKGWIAYNPRTMRPPSLTPDTKFVKLLS
WNVNGLRALLKLEGFSALQLAQREDFDVLCLQETKLQEKDVEAIKQSLLNGYNSSYWTCS
AAKLGYSGTAIISRIRPLSVRYGLGISDHDTEGRLVTVEFDTYYLISAYVPNSGDGLKRL
SYRVTQWDPSLSDYIKELEKSKPVILTGDLNCAHEEIDIFNPAGNRRSAGFTDEERQSFK
SNFLSKGFVDTFREQHPGVVGYTYWGYRHGGRKTNKGWRLDYFLVSESVADKVHDSYILP
DVTGSDHSPVGLILKL
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgacacagatattgaaactagggtttcagaatttcagtatttgtacgagaaaaaccgat
gcgaagaaccttttctgcgtctcctttcccttgttgattgaaagctttgcagttgttccc
agggatttggggcttcgggcattggtttttgtcaaagctagagatttgggctctaagcaa
ctctgttggtattcggcttcacctgcagaactgagtgaatcaatggatatcaacccagaa
attaggaaggctgttgtcaggggaagccgggccagagctcgaaaaattgaaactgagaat
tttgagattgatatggatacagctgaaaggatgacagttcgagaactcagagaaaaatta
aggagcattggggttcccacaagaggtggtaaacgtgatcttttgtctgcattggaggct
ttcttaaacaacagagaagatgaaaagcagcaatcttctgtaatgaaaacaatttgtcct
gaaaaaagtttgtcaaaaaggaagggtaagagattgtccagtgaagatcaaattcaggaa
gcaaacactgttttggagggttcaggccttaaatgctacaagagaagagtaaagcaggtc
aaagttgaggtcaacattcaagaagtcaagactacactggttaaagcaaagcagaagcag
cccatgaaaactaatgaagtgtcagataaggaatcctcccagttgaagaaaacagcctcc
ctggaaattgcctcaacggttgttgaaccttctggagaggctagtctttctgtaaaccaa
aatgaaccttggacgatttttgcccacaagaagccacagaaagggtggattgcatacaat
ccgagaactatgaggcccccctctctaactcctgatacaaaatttgtgaaattattgtct
tggaatgtcaatggattgagagctttactgaaactggagggcttttctgctctccaactt
gcacagagagaagattttgatgtgttgtgcttgcaagagaccaaactacaggagaaggat
gttgaggcaattaaacagtctctcctaaatggctacaacagtagttattggacttgcagc
gctgcgaaacttgggtattctggtacagcaattatctcgcggataaggccactttctgtt
agatatggactgggcatatccgatcatgatactgaaggacgacttgtgactgtggaattt
gatacttattatttaataagtgcatatgtacctaattctggagatggtctaaaacgactg
tcttacagggtcacacagtgggatccatctctcagcgattacattaaagagctagaaaag
tccaagcctgtcattttaactggtgatctgaactgtgctcacgaggagatagatattttt
aaccctgctggaaatagaagaagtgctggctttacagatgaagagagacagtcattcaag
tcaaatttcttgtctaaaggttttgttgatacctttagagagcagcatcctggtgttgtt
ggttatacatactggggttacaggcatggtggacgcaaaacaaataaaggatggcggctt
gactacttcctagtctctgaatccgtggccgacaaggttcacgactcttacattctccca
gatgttactggcagtgatcacagtcctgttggcctcattctcaagctctag
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