Diospyros lotus (date-plum): 127788668
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Entry
127788668 CDS
T10632
Name
(RefSeq) RNA-binding motif protein 25 isoform X1
KO
K12822
RNA-binding protein 25
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127788668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dlt03041
]
127788668
Spliceosome [BR:
dlt03041
]
Complex A
U1 snRNP components
U1 related factors
127788668
Complex B
127788668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
SUS_EPBD
Motif
Other DBs
NCBI-GeneID:
127788668
NCBI-ProteinID:
XP_052173185
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All DBs
Position
13:1880425..1888910
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AA seq
979 aa
AA seq
DB search
MADSPATPANTESNSQPSEPENPPSQSNQPDVSPRTSFVPANPNPTSNSNPNPNPNPTPP
PPPANVAPAQPPVIQPYALPAAPSFRPAVPPVPVPSAPQFSPLPVPNYQSAGHPNPGVQP
PGVSPMPSMVPGVVSGAGSVAMSVPPMMPPYGAPGQPPNPALRPYMPLPSGYPSMPTAAP
QGTIPPPGIPRYPSPYAPMVRPAFPARPPGAIGIVPPLSRPPVPGIRGPIIPPVVRPVTI
PSVAPTEKPQTTVYVGKIAPTVENDFILSLLQLCGPVKNWKRVQDPTNGTPKSFGFCEFE
SAEGVLRAFRLLTKLNVDGQELLINVTQATKEHLKRYVEKKAESSKKVRETETEGTEKGD
ESLRSAEKSEASKPSAEGSKKDDNDLGNGEKNDTACFSIVTDEDREADREVSEKLTSMIE
ERLKNKPLPPPPPPPQPAADPSGNSNSEQPARSKDGDSDVDIMRNDGAEDKHDDEMTSES
KHTSEHDKPETSSPDRSRRSDRRSRDKERDLKREKERELERYEREREQERARREREREYK
SKEDERRYRARVKEWESREREKEYLRKLEKEKEKEREYKRKREVAEHEHESDDGDSKRRK
HKSSGSEERKRRLREKEDDLADRLKEEEEAAEAKRRADEELQQQKRREKDERELFAGNIA
NGSDKAVSFDETNLVIKDSTVEQTHDNESGHGSYVGGGIVQNGNGDESVVGKIASSDMRQ
NVNVQAKKLGFGLVGSGKRTSVPSVFNEEEDEDAQKEKKMRPLVPIDYSTEELQAVQSGL
SGALSPNLAAAAEFAKRISSVTPKEDRPDVEKERSRQSHDRSSQRDRDRNDDETNRTRDD
SRKETFERDRDREQGLVKAKTPDNKKLLDAKQLIDMIPKTKDELFSYEINWAVYDKNELH
DRMRPWISKKITEFLGEEEATLVDYIVCSTQEHVKAYEMLERLQSILDDEAEMFVLKMWR
MLIFEIKKIETGLALRSKT
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggcggattctccggccactccggcgaacactgaatccaattctcagccatccgaaccc
gaaaatccaccctcacagtcgaaccaacccgatgtctctccacgcacctcattcgtaccg
gcaaatcctaatcctacctctaactctaaccctaaccctaaccctaatcctacccctcca
ccaccgccagccaacgtagctccagcgcagccaccggtaattcaaccgtatgcgctgccg
gcagcgccgtcgttccgcccggctgtgccgccggttccggtcccctccgcgcctcagttc
tcgcccctgcccgttcccaattatcagagcgctggccatccgaaccccggcgttcagcca
ccgggagtgagccccatgccgagcatggttcccggcgttgtgagcggcgcgggttcggtt
gcgatgtcagtgccgccgatgatgccaccatatggtgcccctggccagcctcccaaccct
gctctcagaccttacatgccgctgcccagtggttatccatcaatgccaactgctgctcct
cagggaaccattcctcctccgggcattcctcgttatccctctccatatgcgccaatggta
aggccagcatttcctgcacgtcccccaggtgcaattggcattgtcccgccactttcacgg
cctccagttcctgggattcggggtcctattattccccctgttgtgaggccagttactatt
cccagtgtcgcgccaacagagaaaccccaaactacagtgtatgttggcaagatagcccca
acagtagaaaatgatttcattctttctcttcttcaactttgtggacctgttaagaactgg
aaacgtgttcaagatcccacaaatggaactccaaaaagttttggattttgtgaatttgag
tctgctgagggagttctccgtgcttttaggctgctgactaaattaaatgttgatggacaa
gagctgttgataaatgttacccaagcaacaaaagagcatctaaagcgctatgttgaaaag
aaagctgaaagctcaaaaaaagtcagagagactgaaactgaagggactgagaaaggggat
gaaagtttacgaagtgctgagaagagtgaggcttctaagccttctgctgagggatcaaag
aaagatgataatgatttggggaatggagaaaaaaatgacactgcctgctttagcattgtg
actgacgaagatagggaagctgaccgagaggtgtcagagaagcttacaagcatgatagaa
gagaggttaaagaacaaacctctcccaccaccacccccgcccccacaaccagctgctgat
ccttcaggcaactcgaactcagagcagccggcaagatccaaagatggagactcagatgtg
gatataatgagaaatgacggagcagaggataaacatgacgacgagatgacaagtgaaagc
aagcatacaagtgagcatgacaaacctgagacaagctcacctgacaggagtagacgaagt
gataggaggagcagagataaggaacgagacctgaaacgggagaaagaaagggaacttgag
agatatgaaagagaaagggaacaggaacgagctaggagagagagggagagagaatataag
agcaaggaagatgagcgtaggtacagggctcgtgtgaaagagtgggaatctagggagaga
gagaaagagtatttgcggaagctggagaaagagaaggagaaagaaagggaatacaagagg
aagcgagaagttgcagaacatgagcatgaaagtgatgatggtgattccaaaaggaggaaa
cacaaaagtagtgggtctgaggagagaaaaagaaggttacgggaaaaggaggatgacttg
gctgacagacttaaagaagaggaggaagctgctgaggcaaagagaagagctgatgaggaa
ctacagcagcagaaacggcgtgagaaagatgaacgagaactttttgctggtaatatagct
aatggaagtgacaaggctgtgtcatttgatgaaactaatctggtgatcaaagatagcact
gttgaacagactcatgacaatgaatccggtcatgggagctatgttggtggtgggattgta
caaaatggcaatggtgatgaatctgttgtgggaaaaattgcttcctcagacatgcggcaa
aacgttaatgtccaggctaaaaagttgggatttggtcttgtaggctcaggaaaaagaact
tctgttccctctgtttttaatgaagaggaagacgaagatgcacaaaaagagaaaaaaatg
aggcctcttgttcccattgactattcaactgaggaactgcaggctgttcaatctggtctt
tctggtgcactatctccaaatttggctgctgcagcagaatttgcaaaacgtatctcaagc
gtcactcccaaagaagacaggcctgatgtggaaaaggaaagaagcaggcagtctcatgat
aggtctagccagcgggatcgagaccggaatgatgacgagactaatcgtacgagagatgat
agtagaaaggagacttttgaacgtgacagggatcgggagcaaggattggtcaaagcgaaa
accccagataataagaagcttttggatgcaaaacagttgattgatatgataccgaagacc
aaggatgagttgttttcatatgaaattaactgggctgtctatgataagaacgagcttcat
gatagaatgagaccttggatctctaagaagataacagaatttttgggagaggaagaggct
acacttgtggattacattgtgtgcagcacacaggaacatgtgaaggcatatgaaatgctg
gagaggcttcagtctatcttggacgacgaagctgaaatgtttgtgctgaagatgtggagg
atgcttatatttgagattaagaagatagagacaggactcgctttgagatccaaaacctga
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