KEGG   Diospyros lotus (date-plum): 127788822
Entry
127788822         CDS       T10632                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 isoform X1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
dlt  Diospyros lotus (date-plum)
Brite
KEGG Orthology (KO) [BR:dlt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dlt04121]
    127788822
   03400 DNA repair and recombination proteins [BR:dlt03400]
    127788822
Enzymes [BR:dlt01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     127788822
Ubiquitin system [BR:dlt04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    127788822
DNA repair and recombination proteins [BR:dlt03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    127788822
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-RING_2 zf-C3HC4 zf-C3HC4_3 ResIII zf-RING_5 DEAD zf-C3HC4_2 zf-rbx1 zf-RING_UBOX zf-ANAPC11 CAA_C
Other DBs
NCBI-GeneID: 127788822
NCBI-ProteinID: XP_052173412
LinkDB
Position
13:34991472..35013756
AA seq 903 aa
MGSDVESDPVGFFMSLERWPGDMDCDDGGGGGGGDDMGPASQSSETYLLGFVIVNIVGLQ
YYTGTISGREMVCLVREPLNPYDPNAIKVLNTRTVQVGHVERYAAMVLAPLMDQNLITVE
GIVPNTPARGSRYRIPVQIHIFAFRESFSRVKSAISRGGLQLISSNDASFTLSQAVVVKE
RKASQDGRSVDEIFKLVDENVSNKSAMEALEPPKEVIKSELFLHQKEGLGWMVHRENSCE
LPPFWEEKDGAYVNVLTNYQTRTRPEPLRGGIFADDMGLGKTLTLLSLIAIDKCGCASPF
SVNSSREIAEQSEGTDGKDDKLVVLGSKKLKRGRVSKNDSSSRKTKKTEATHFDKIAKGK
SVGGLDSCADASTLKPTLIVCPPSVFSTWVTQLEEHTRPGKFKVYMYYGERTKDVQELQK
YDIVLTTYSTLACEEPGDGLPMKKIKWWRVILDEAHVIKNANSQQSRAVTSLNAERRWVV
TGTPIQNGSLDLFSLMAFLRFEPFSIKSYWNSLVQRPLSHGNEKGLSRLQVLMATISLRR
TKDKALIGLPPKTMETCFVELSAEERELYDLMENEAKGVVRNYIHAGSVTSNYSTVLGII
LRLRQICTDMALCPSDLKSFLPSNNIGDVSNNPELLRKMVSLLQDGEDLDCPICICPPND
VVITCCAHIFCRSCILKTLKRTKPCCPLCRRPLSETDLFSSLPDSSDTDNSKVTRSSTSS
KVFSLLKLLSASRDQNPTTKSVVFSQFRKMLILLEEPLKAAGFKVLRLDGTMNAKRRAHI
IQEFELPAPDGPTVLLASLKASCAGINLTAASRVYLLEPWWNPAVEEQAMDRVYRIGQKE
DVKIVRMIARNSIEERILELQEKKKKLAREAFGRRGLKDRRDINIDDLQTLMSFKLVAVG
LDF
NT seq 2712 nt   +upstreamnt  +downstreamnt
atgggatcggacgtcgaaagcgatccggtagggtttttcatgagtctcgagcggtggcct
ggagacatggactgtgatgacggcggcggcggcggcggcggagatgatatgggtccggcg
tcgcagtcgtcggagacctacttgctcggtttcgtcatagtgaacatcgttggcttgcag
tactacaccggcacgatcagcggccgggaaatggtgtgcctggtccgcgagcccttgaat
ccctacgacccgaacgcgattaaggtgctcaacaccaggacggttcaggttggccacgtg
gagcgctatgcagcgatggttctcgcgccgttgatggaccagaatttgatcaccgtcgaa
ggcattgttcccaacactccggcgaggggtagccgctacaggattccggttcaaatccat
atatttgccttcagggagtcattttccagggtcaagtctgcgatttcgcgaggtggcttg
cagttgatttcgagcaacgacgcgtcttttaccttgtcgcaggcggttgtggttaaggag
aggaaggccagccaggacggcaggagcgtggatgagatatttaaactggtggacgagaat
gtcagtaataaatccgcaatggaggcgctggagccacccaaagaagttatcaaatcggag
cttttcttgcaccagaaggaaggcttggggtggatggttcacagggagaattcttgcgag
ttgcctccattctgggaggagaaagatggtgcttatgtcaatgtgttgactaactatcag
acccgtacccggcctgaacctctacggggtggaatttttgcggatgacatggggttgggt
aaaactctcacattgctttctttgattgccattgataaatgtggttgtgcaagtcccttt
tcagttaatagcagtagagaaattgcagaacaaagtgagggaacagatgggaaggatgat
aaattggttgttttgggtagcaagaagttgaagagggggagggtaagtaaaaatgatagt
agttcacggaagacaaaaaagactgaagctacccattttgataaaatagcgaaaggaaaa
tctgttggtggattagatagttgtgctgatgcttcaactttaaaaccaacactaattgtg
tgtcctccctctgtgttttcgacatgggtgacacagttggaagaacacactagaccggga
aagtttaaggtgtatatgtattatggggaacggacaaaagatgtacaggagcttcagaag
tatgacattgttttaacaacctatagcactctagcctgtgaagaacccggggatggatta
cctatgaagaagataaagtggtggcgagtcattctggatgaggcacatgtgattaagaat
gcaaattcccaacaaagccgtgctgttactagcctgaatgctgagcggaggtgggttgtg
acagggacaccaatacaaaatggctcattggatttattctctctcatggcattcttgagg
tttgaacctttctcaattaaaagctactggaatagcttggttcagaggccactttctcac
ggaaatgagaaagggctttcgcgcttgcaggttctaatggcaaccatttcactgaggaga
acaaaagacaaggctttaattgggttgccacctaaaactatggaaacctgtttcgtggaa
ctttcagctgaagagcgtgagctgtatgatctgatggaaaatgaggcaaagggtgttgtt
cggaactatatccatgctggtagtgttacaagcaattactcaactgtgctaggtataatt
ttacggctacgccaaatttgtacagatatggccttgtgtccttcagatctgaaatcattt
cttccatccaacaatattggagatgtatccaacaatccagaattgctgagaaagatggtt
tcattgctgcaagatggagaggacttagattgtccaatttgtatttgtcctccaaatgat
gttgttattacatgttgtgctcacatcttttgtcggtcctgcatcttaaaaaccctcaaa
cgtactaaaccatgctgcccgttatgtcgtcgtccactgtcagagactgatctcttctct
tccctaccggattcctctgacacagacaactccaaagttacccgttcttctacatcttca
aaagtgttctctctcttaaaactcctttcagcatcaagggatcaaaaccctacaactaaa
tcagttgttttctctcaattccgtaaaatgttgattttgcttgaagagccactaaaagca
gctggttttaaggtgctgcgcttagatggaacaatgaatgcaaaaaggagagctcacata
atccaagaatttgagctcccagcaccagatggacctacagttttacttgcaagcctgaaa
gcttcatgtgctggtataaatcttacagctgcttctagggtgtacttgttggagccatgg
tggaacccagctgttgaggagcaagccatggatcgggtctaccggattggacagaaggag
gatgtgaagattgtgaggatgattgctcgaaatagcattgaagagaggatattggaattg
caagagaaaaagaagaagctggctagagaagcttttggtaggaggggcctaaaggatagg
agggatataaacattgatgatctccaaaccctgatgtccttcaaacttgtagcagttggt
ttggatttttga

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