Diospyros lotus (date-plum): 127789010
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Entry
127789010 CDS
T10632
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127789010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dlt03019
]
127789010
Messenger RNA biogenesis [BR:
dlt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127789010
mRNA degradation factors
5'-3' decay
Decapping complex
127789010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
127789010
NCBI-ProteinID:
XP_052173700
LinkDB
All DBs
Position
13:complement(3560409..3580124)
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AA seq
364 aa
AA seq
DB search
MSQTGKLMPNLDQNSTKLLNLTVLQRIDPYIEEILITAAHVTFYEFNIDLNQWSRKDVEG
SLFVVKRNTQPRFQFIVMNRRNTDNLVENLLGDFEYEVQVPYLLYRNAAQEVNGIWFYNS
RECEEVANLFNRILSAYSKVPPKPKSSSKSEFEELEAVPTTAVIEGPLEPPLTAPASTGV
AEDSSFVNFFSTAMNIGHGAPGVVNSGYPTSSSVPASRVPSFSPSPVPTPQVPSVPAPPL
ASSTTPVPLQDTPDPTKNSNWVANLIKPSSFFTPPSSALMNPPISSPLPSALHPPLNLQR
HHGAPILQPFPPPAPPPSLTPATTTAPNYGLPNREKVRDALLMLAQDDKFIDMIHQALLK
MHQS
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagaccgggaaattgatgccaaatctggaccagaacagcaccaaattactcaac
ctcactgtgcttcagagaatagatccctacattgaggagatcctaatcaccgccgcgcac
gtcaccttctacgaattcaatattgatctcaaccaatggagtcgcaaggacgttgagggc
tctctgttcgtggtcaagaggaacactcagccgcggttccagttcattgttatgaacagg
cgaaatacagataatcttgtggagaatctcctgggtgattttgagtatgaggttcaggtt
ccatatctgttgtatagaaatgctgcccaagaagttaatggaatttggttctacaattcc
cgcgagtgtgaggaagttgcaaacctctttaataggatactcagtgcatactcaaaggtg
cctccaaagccaaaatcttctagtaaaagtgagtttgaagaacttgaagcagtcccaacc
actgcagtgattgaagggccactggaaccgccactcactgctcctgcttctactggggtt
gctgaagattcttcctttgtgaacttcttcagtacagccatgaacatcggacatggtgct
ccaggtgtggtaaactctggatatccgacatcatctagtgttcctgcatctcgtgttcct
agtttttctccctctcctgttccaactcctcaagttccatctgttcccgctcctccattg
gcttcatccaccactcctgtccccctccaggacacccctgacccaaccaagaatagcaat
tgggttgccaatcttatcaagccatcttccttcttcactccaccttcgtctgctttgatg
aatccacctatctcctcgccgctgccttctgctcttcaccctccattgaatctgcaacgc
caccatggtgctccaattcttcaaccctttccacctccggcaccacctccatcactaact
cccgcaaccactactgctccaaactatggactacctaatagagagaaagttcgcgatgca
cttctaatgcttgctcaggacgataagttcatcgacatgatccaccaagcattgctgaaa
atgcatcaatcatga
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