KEGG   Diospyros lotus (date-plum): 127789214
Entry
127789214         CDS       T10632                                 
Name
(RefSeq) histone deacetylase 9 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
dlt  Diospyros lotus (date-plum)
Pathway
dlt03082  ATP-dependent chromatin remodeling
dlt03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:dlt00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    127789214
   03083 Polycomb repressive complex
    127789214
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dlt03036]
    127789214
Enzymes [BR:dlt01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     127789214
Chromosome and associated proteins [BR:dlt03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     127789214
   HDAC complexes
    Sin3A-HDAC complex
     127789214
    BRAF-HDAC complex
     127789214
    REST complex
     127789214
    SHIP complex
     127789214
    MiDAC complex
     127789214
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     127789214
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    127789214
  Chromatin remodeling factors
   NuRD complex
    127789214
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 127789214
NCBI-ProteinID: XP_052174000
LinkDB
Position
1:complement(26477042..26499302)
AA seq 430 aa
MRSKDRIAYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLSYELHNKMEIYRPHKAYPVEL
AQFHSADYVEFLHRITPDTQHMFLNDLARYNLGEDCPVFDNLFEFCQIYAGGTIDAARRL
NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDLFFPGTGDVKAIGEREGKFHAINVPLKDGIDDPSFTRLFKT
IIAKVVETYLPGVIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY
TKENVARCWTVETGVLLDTELPNQIPENEYIKYFGPDYSLKIPNGHIENLNSKSYLSTIK
MQVLENLRSIQHAPGVQMQEVPPDFYIPDFDEDELNPDERVDQHTQDKQIQRDDEYYEGD
NDNDHNMDDV
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgcgttccaaggaccggatcgcctacttctacgacggggatgttggaaacgtgtacttt
gggcctaaccacccgatgaagccacatcgcctttgtatgacccaccaccttgttctatcc
tacgagcttcataataagatggaaatttataggccacacaaggcttatccggttgagctg
gcacagtttcattcagctgattacgttgagttcttgcatcggattaccccagacactcaa
cacatgttcttgaatgatttggccagatataatcttggagaagattgccctgtttttgac
aacctgtttgaattctgtcaaatttacgctggtggcacaatagatgctgcgcgaaggttg
aacaatcagctatgtgacattgccataaattgggctggtggattacatcatgccaagaag
tgtgaggcatctggattttgttacatcaatgaccttgttttggggattttagagcttcta
aagtatcatgctcgagttctgtacattgatatagatgttcaccatggtgatggtgtcgaa
gaagcattttattttacagacagggtgatgactgttagttttcacaagtacggagatttg
ttcttccctggaactggtgatgttaaggcaataggagagagagaagggaaatttcatgcc
ataaatgtcccactcaaagatggaatagatgatcctagctttactcggcttttcaagacg
attattgccaaggttgttgaaacatatttgccgggagtgatagttctacaatgtggtgcg
gattcgcttgctggtgatcgcttgggctgcttcaacctctccattgatggacatgctgaa
tgtgtcaggtttgtcaagaaattcaatttgcctctactggtaactggaggtgggggatac
acaaaagagaatgttgctagatgttggactgttgaaaccggagttcttctagatacagag
cttcccaatcagatcccagaaaatgagtatattaaatattttggaccagactactcattg
aagattccaaacgggcatatagagaacttaaatagcaagtcatatcttagcactatcaaa
atgcaggtgttggagaatcttagatccattcaacatgctccaggtgtacagatgcaagag
gttccaccagacttttatattcctgattttgacgaagatgagctgaatccagatgaacgt
gtagatcaacacacacaagacaagcaaatccagcgagatgacgaatattacgaaggtgac
aatgataatgatcataacatggatgatgtgtaa

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