Diospyros lotus (date-plum): 127789228
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Entry
127789228 CDS
T10632
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127789228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dlt03041
]
127789228
Spliceosome [BR:
dlt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
127789228
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
127789228
NCBI-ProteinID:
XP_052174018
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Position
13:complement(1948814..1954876)
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AA seq
485 aa
AA seq
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MATLADSFLADLDELSDNEADLLDETNDDVEHMEEDDEEDLEDIETLNYDDLDNVSKLQK
TQRYIDIIQKVEDALVKGSDVSNQGMVLEDDPEYQLIVDCNSLSVDIENEIVFIHSFIRD
KYRLKFPELESLVQHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKP
LPEEVLQKTIDACDRALTLDLAKKKVLDFVESRMGYIAPNVSAIVGSAVAAKLMGTAGGL
SALARMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQAEIFQSTPPSLRMRACRLLAAK
STLAARVDSTRGDPTGKTGRTFREEIRKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSIGQSKLAA
KVAKKFKEKQYGSSGATSGLTSSLAFTPVQGIELSNPQALANQLGSGTQSTYFSETGTFS
KIKRT
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcttgctgattctttcctggctgaccttgatgagttgtccgacaatgaagct
gatcttcttgatgagactaatgatgatgtggaacacatggaagaagatgatgaagaggac
ttagaagacatagaaacccttaattatgatgatttggacaatgtctctaagttacagaaa
acacaacgttatattgatatcatacagaaagttgaagatgctcttgtgaaaggatctgat
gtttcaaatcaaggcatggttttggaggatgatcctgaataccagcttatagtagactgt
aattcattgtcagttgatattgaaaatgaaattgtttttatccacagtttcatccgagac
aagtatcgtttgaagtttcctgagcttgaatcacttgttcagcatccaattgattatgcc
agagtagttaaaaagattgggaatgagatggacttaacccttgttgatttggaagggctt
ttaccatcggctattattatggtggtttctgttacagcatcaaccactagtggtaaaccc
cttccagaggaagtcctccaaaagacaattgatgcatgtgatcgagctctcactcttgat
ttggcaaagaaaaaggtcttggattttgttgagagtagaatgggatatattgcaccaaat
gtttctgcaattgttgggagtgctgttgctgcaaaacttatggggacagctggtggtctg
tcagcattagccaggatgcctgcttgcaatgttcagcttctcggtgctaagaaaaagaac
ttagctggattttctactgcaacatctcagtttcgtgtgggttatcttgagcaagcagaa
atttttcagagcacacctccttctctaaggatgcgcgcctgccgactgcttgccgcaaaa
tcaacccttgcagcacgtgttgattctactagaggagatccaactgggaagacaggaaga
accttccgggaagaaattcgtaagaaaattgagaaatggcaggagccacctcctgcaaag
cagcctaaacctcttccagttcctgattctgagcccaaaaagaagagaggtggtcggcgt
ctaaggaagatgaaggaaaggtatgctataacagacatgagaaagctggcaaataggatg
cagtttggtgttcctgaagagagttctttaggtgatggactgggagagggatatggaatg
cttggccaggctgggagtggcaagttgcgtgtatcgattggtcagagcaaactagctgcc
aaagtagctaagaagttcaaggagaagcagtatggaagtagtggtgctacctcagggctt
acatcaagtttagccttcacacctgtgcaggggattgagctgtcaaatccacaggctctt
gcaaatcagcttggtagtggaactcaaagcacctacttttcagaaacaggaacattttca
aagatcaagaggacctga
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