Diospyros lotus (date-plum): 127789237
Help
Entry
127789237 CDS
T10632
Name
(RefSeq) ABC transporter A family member 1 isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127789237
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dlt02000
]
127789237
Transporters [BR:
dlt02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
127789237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
nSTAND3
Motif
Other DBs
NCBI-GeneID:
127789237
NCBI-ProteinID:
XP_052174028
LinkDB
All DBs
Position
13:complement(36959140..37074785)
Genome browser
AA seq
1883 aa
AA seq
DB search
MGNSRRQLKVMLRKNWLLKARHPFVTCAEVLLPTIVMLMLIAVRTRVDTQIHPAQPHIQK
KMFVEVGKGETSPSFVQMLESLLAKGEFLAFAPDTTETKMMIDTLSMKFPLLKMVSRIYK
DESELETYIRSDSYGVCYEIEDCSKPKIKGAIIFHGQGPVLYDYSIRLNHSWAFSGFPDV
HTIMDVNGPYLNDLELGVNTVPILQYSFSGFFTLQQVVDSFIIYASQQPVNKLGTEDTGS
PFGLSFDEPSKLEMPWTQFNPSNIRLAPFPTREYTDDEFQSIVKEVMGVLYLLGFLYPVS
RLISYSVFEKEQKIKEGLYMMGLKDEIFYLSWFITYAFQFAISSGIITLFTMTTLFQHSD
KSVVFTYFFLFGLSAIMLSFLISTFFRRAKTAVAVGTLSFLGAFFPYYTVNDESGPLVLK
VIASLLSPTAFALGTVNFADYERAHVGLRWSNIWQASSGVNFLVCLLMMLLDTLLYCLIG
LYLDKVLPRENGIRQPWNFLFPKCIWRRKSTTEHSACSSDTNPGNNDFPGNDPFVPAVEA
MSLEMKQQELDGRCIQIRNLRKVYTANKRRCCAVKSLQLTLHENQILALLGHNGAGKSTT
ISMLVGLIPPTSGDALVFGRNILTDMDQIRKELGVCPQNDILFPELTVKEHLEIFANLKG
VKKESLEKVVLEMVEEVGLADKVNTVVRALSGGMKRKLSLGIALIGNSKVIILDEPTSGM
DPYSMRMTWQLIKKIKKGRIILLTTHSMDEADVLGDRIAIMANGSLKCCGSSLFLKHQYG
VGYTLTLAKAVPSATVAADIVYRHVPSATCVSEVGTEICFKLPLASSSSFESMFREIENC
IRRSGPNSESEAKEHNRSFGIETYGISVTTLEEVFLRVAGCDINKAECIEDKKTLLGSDS
IVSRASDDSAPRNIMPLKVSGKYRVIEIIVTVMRRARSLLVDTVQSFLNFVSMQCCCCCC
YFLVRSTFWEHSKALFLKRAISARRDRRTIVFQLVIPAVFLFFGLLFLQLKPHPDQQSVT
LTTSYFNPLLSGGGGDAPIPFDLRWPISNKVSHFVKGGWIQKFRPSAYRFPQSEKALTDA
IEAAGPTLGPALLSMSEYLMSSFNESYQSRYGAIVMDDQNDDGSLGYTLLHNSSCQHAGP
TYINVMNSAILRLATLNENMTIRTRNHPLPMTKSQHLQHHDLDAFAAAVVLSIAFSFIPA
SFAVAIVKEREVKAKHQQLISGVSIWSYWASTYIWDFVSFLLPAFSAIILFYIFGLDQFT
GRGSLLPTILLFLEYGLAIASSTYCLTFFFSEHTMAQNMVLLIHFFTGLILMVISFIMGF
IDTTASANSFLKKFFRISPGFCFADGFASLALLRQGMKDGRGDRLLDWNVTGASICYLAA
EAIVYYLLTLGLELVPPHKITSVSIDQWKNIKKFFQRTSSSYMEPLLESSTKYVALDLDD
DVDVQEERNRVLSGSADNAIIYLCNLRKVYGTKVAVHSLTFAVQEGECFGFLGTNGAGKT
TTLSMLSGEEHPSDGTAFIFGKDISSNPKSAHRHIGYCPQFDALLEFLTVWEHLELYARI
KGVPEYKLKDVVKEKIMEFDLLKHAHKPSFALSGGNKRKLSVAIAMIGDPPIVILDEPST
GMDPIAKRFMWEVISRLSTRRGKTAVILTTHSMNEAQALCTRIGIMVGGRLKCIGSPQHL
KTRYGNHLELEVKPTEVSLVDLENLCLLIKERLFDFPSHPRSLLGELEVCIGGADSITSE
NASVAEIRLSGEMIIIIGRWLGNEERTRTLISPTEHSSGVFGEELSEQLVRDGGIPLPIF
SEWWLAKEKFSTIDAFIVSSFPGATFQGCNGLSVKYQLPYGEDISLADVFGYLERNRDML
GIAEYSVSQSTLETIFNHFAASS
NT seq
5652 nt
NT seq
+upstream
nt +downstream
nt
atggggaactcgcggcgacagttgaaagtgatgcttcgcaagaactggcttctcaaagct
cgccatcctttcgtcacttgtgcggaggttttgcttccgactattgtaatgctgatgcta
attgctgtaaggactcgagttgatacacaaattcatcctgctcagcctcacattcagaaa
aagatgtttgttgaagtgggaaaaggtgaaacatctccctctttcgttcaaatgttggaa
tcactgttggccaagggcgagtttttagcatttgctccagatacaacggaaacaaaaatg
atgatcgacacattgtcaatgaaatttcctttactaaagatggttagtagaatttacaaa
gatgagtcagagctcgaaacctacatacgttcagattcttatggtgtttgctatgaaatt
gaggattgttcaaaacccaaaattaaaggagcaataatatttcatggtcaaggtcctgtg
ttatatgattatagcatccgcctcaaccactcatgggctttctcaggatttccagatgtt
cataccatcatggatgtgaatggtccttatctcaacgacttggaattgggtgttaacact
gtgccaatacttcagtacagcttcagtggatttttcacgcttcaacaagttgtggattct
ttcataatatatgcttctcagcaacctgtcaacaagttaggcacagaagatactgggtca
ccttttgggctttcatttgatgaaccttccaagttggagatgccatggacacagttcaac
ccttcaaacataaggcttgcacccttcccaactcgtgaatatacggatgatgagttccag
tctattgtgaaggaagtcatgggagtgctttacctgctgggatttctctatccagtgtct
cgcctaatcagctattctgtgtttgagaaggaacagaagataaaagaaggtctctacatg
atgggtctgaaagatgagatattctatctttcttggtttatcacttatgctttccagttt
gcaatttcttcagggatcatcaccctattcacaatgactacccttttccagcatagtgat
aagtcggtggttttcacatacttttttctgtttggcctcagtgcaataatgctttcattc
ttgatatctacattcttcagaagagcaaaaacagctgtagctgttggtaccctttctttt
ctgggggccttcttcccttactacactgtcaatgatgagtctggtcctttggtactaaag
gtcattgcttccttgctttctccaacggcttttgctttaggtactgttaactttgctgac
tacgagcgtgctcatgttggacttcgttggagcaacatatggcaggcatcgtccggagtg
aattttttggtctgtctcctgatgatgttgcttgacacacttttgtactgtttgattggt
ctctacctagacaaggtccttccaagggaaaatggtattcgtcaaccttggaattttcta
tttcccaagtgcatttggagaaggaaaagtaccactgaacattctgcttgcagttctgat
acaaaccctgggaacaatgattttcctggaaatgatccttttgtacctgctgttgaagca
atgagcttggagatgaagcaacaagagcttgatggcagatgcatccagataaggaatctg
cggaaggtgtacactgctaacaaaaggaggtgttgtgctgtgaagtccttacagcttacc
ttacatgaaaatcagattcttgcccttctaggacataatggagctgggaaaagcacgacg
atttcaatgcttgttggactaattcctcctacttctggggatgctttggtctttgggagg
aatattttaactgacatggatcagataaggaaagaattgggtgtttgtccccagaatgat
attctttttcctgaattgactgtgaaggagcatttagaaatatttgctaatttgaaaggt
gtgaagaaagaatctctggagaaggttgtgcttgaaatggttgaggaggtgggattggct
gataaagttaatactgttgtgagggcactttctggaggcatgaaaaggaagttgtccctt
ggaattgcactaattggaaatagtaaggttattattcttgatgaacctactagtggaatg
gatccatattcaatgaggatgacgtggcaattaatcaaaaagattaagaaaggaaggatt
atactgctaacaacacactctatggatgaagctgatgtgttaggagatcggatagctatc
atggcaaatggttcactgaaatgctgtggcagctcacttttcttgaagcaccaatatggg
gttggttatactcttactttggctaaggcggttcccagtgccactgtagctgctgatatt
gtttaccgacatgttccttcagcaacatgtgtgagcgaagttggcacagagatttgcttc
aagcttcctttagcgtcttcatcgtcctttgagagcatgtttagggaaattgaaaattgc
atcagaagatcaggtccgaattcagaatctgaagctaaggagcacaatcggtcttttggc
attgagacttatggtatatctgtgacaactcttgaagaggtattcttgagagttgcagga
tgtgacattaataaagccgagtgcattgaggataagaaaactctgcttggatctgattct
attgtttctcgagcctctgatgactctgctccaaggaatattatgcccctaaaagtaagt
ggaaaatatagagtcattgaaatcattgttacagtaatgaggagagctcgcagtttactt
gtggataccgtgcagagtttcttgaactttgtaagcatgcaatgttgttgctgttgctgt
tacttcctagtaaggtcaacattctgggaacattctaaagcattatttttaaagagggca
atatctgctcgaagagatcggagaacaattgtttttcagctagtgattcctgctgtcttc
ttgttttttggtcttctttttcttcaacttaaaccacatcctgaccagcagtctgttaca
cttacgacttcatattttaatcctcttttaagtggtggaggtggtgatgccccaatacct
tttgatctacggtggcctatctcaaataaggtttcccattttgttaaagggggttggatt
cagaagtttaggccaagtgcatatagattccctcagtcagaaaaggctttgacggatgct
attgaggcagcagggccaacattgggtcctgcccttctttctatgagtgaatatctgatg
tctagctttaatgaatcgtaccagtctaggtatggagcaattgtaatggatgaccagaat
gatgatggaagtctaggatacactctgctgcacaacagttcttgtcagcacgctggtcca
acatatatcaatgttatgaattcagcaattcttaggcttgctactttaaatgaaaatatg
acaatcagaacccgcaaccaccctctgcctatgactaaaagccagcacttgcaacatcat
gatttggatgcatttgcagctgcagtggttctcagtattgctttctcctttatccctgca
tcttttgcggttgctattgtaaaggaacgcgaagtgaaggcaaaacaccaacagctgatt
agtggagtatcaatatggtcatattgggcgtcaacatatatatgggattttgttagcttc
ttgttgcctgcattttctgcaataattctcttttacatctttggcctggatcagtttact
ggaagaggttctttattaccaacaatcctcttgtttttggaatatggacttgctatagca
tcatcaacatattgcctcacttttttcttttctgaacatacaatggcacagaacatggtt
ctattgattcactttttcactgggctaattctaatggtcatatccttcattatgggattc
atagatacaactgcaagtgcaaattcttttctaaagaaattcttcagaatatcaccggga
ttttgctttgctgatggatttgcttccctggctcttctgcggcaagggatgaaagatgga
cgtggtgatagacttcttgactggaatgttactggtgcctctatttgttatttagcagcc
gaggcaattgtttattatcttctcactcttggtcttgaacttgttcctcctcacaagata
acttcagtctccattgaccagtggaaaaacataaagaaattcttccaaagaacctccagt
agttatatggaacctcttctggagtcatcaacaaaatatgttgctcttgaccttgatgat
gatgtagatgttcaggaagaaagaaatagggtactttcaggttctgctgacaatgcaatt
atctacttgtgtaatcttcgaaaggtgtatggtacgaaagttgctgtacattcattaact
tttgcagttcaggaaggggaatgttttggatttctaggaacaaatggagcagggaaaact
acaactctttcaatgctatccggagaagaacaccctagtgatggaactgcgttcatattt
ggcaaagacataagttcaaaccccaagtctgcccaccggcatattggctactgcccacag
tttgatgctcttcttgagtttttaactgtttgggagcatcttgagctctatgcaagaata
aaaggagtcccagaatacaagctgaaagatgtggttaaggaaaagataatggaatttgac
ttgttgaagcatgcccataaaccttcatttgctcttagtgggggaaacaagcgcaaattg
tctgttgcaatagcaatgattggagatcctcccatagtgatccttgacgagccatccacg
ggtatggatcctattgccaaacgattcatgtgggaagtgatatcccgtttatcaacaaga
cgaggaaaaactgcagttatcctaaccactcacagcatgaatgaagcccaagcactatgc
actcgtattggaataatggttggaggacggctaaaatgcattgggagtcctcaacatctg
aaaacacgttatgggaatcatcttgagcttgaggttaaaccaaccgaagttagcttggta
gatctagaaaatttgtgtcttttgattaaggaaagactctttgactttccttctcatcca
aggagcttgcttggtgaacttgaagtttgcattgggggcgctgactccataacatcagaa
aatgcatcagtggctgagattaggttgtcgggggagatgataatcatcattggaagatgg
cttggcaacgaagaaaggacaaggacactcatatctccaacagaacattcttctggggtt
tttggtgaagaattgtcagagcagttggttcgtgatggtggcatcccattgccaattttt
tctgagtggtggttagccaaggagaagttctctacaattgatgcatttattgtgtcttca
tttcctggtgcaacatttcaaggatgcaatgggttgagcgttaaatatcagttgccttat
ggagaagacatctcgcttgccgatgtttttgggtacttggagaggaacagagatatgttg
ggcatagccgaatacagcgtcagccaatcaacactcgagacgattttcaatcattttgca
gcaagctcttga
DBGET
integrated database retrieval system
