KEGG   Diospyros lotus (date-plum): 127789841
Entry
127789841         CDS       T10632                                 
Name
(RefSeq) ras-related protein Rab5A-like isoform X1
  KO
K07887  Ras-related protein Rab-5A
Organism
dlt  Diospyros lotus (date-plum)
Pathway
dlt04144  Endocytosis
dlt04145  Phagosome
dlt04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:dlt00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    127789841
   04145 Phagosome
    127789841
   04148 Efferocytosis
    127789841
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dlt04131]
    127789841
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dlt04147]
    127789841
   04031 GTP-binding proteins [BR:dlt04031]
    127789841
Membrane trafficking [BR:dlt04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    127789841
 Endosome - Lysosome transport
    127789841
Exosome [BR:dlt04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   127789841
  Exosomal proteins of other body fluids (saliva and urine)
   127789841
  Exosomal proteins of colorectal cancer cells
   127789841
  Exosomal proteins of bladder cancer cells
   127789841
GTP-binding proteins [BR:dlt04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    127789841
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA TsaE AAA_24 AAA_16 MMR_HSR1
Other DBs
NCBI-GeneID: 127789841
NCBI-ProteinID: XP_052174816
LinkDB
Position
14:18236598..18267741
AA seq 199 aa
MARPGNKIIPAKLVLLGDMGTGKTSLVLRFVRGQFFDKQEPTIGAAFFTQILSVPEATVK
FDIWDTAGQERYHSLAPMYYRGAAAAVVVYDISSMDTFVQAKKWVQELKKQGNPNLVMAL
VANKSDLESIREVGNEEAEQFSEENGIFFKATSAKTSVNVNDLFYDIAKRLAKGSLSKPS
GTNLHGEAQSQRISFCCST
NT seq 600 nt   +upstreamnt  +downstreamnt
atggcgaggcctggcaacaagattattccggccaagctggtacttttgggtgacatggga
actgggaaaaccagtttggttttaagatttgtcagaggccaattttttgacaagcaggaa
ccaaccattggagcagcttttttcactcagatattatcagtacctgaagcgactgtgaaa
tttgatatatgggacacagcaggacaagaacgataccatagcttggctccgatgtattac
cgtggtgctgcagcagctgttgttgtgtatgacatctcaagcatggatacatttgttcaa
gccaaaaaatgggttcaagaactgaaaaaacaaggaaatccaaatctggtaatggcattg
gttgcaaacaaatcggacttggaatcgatcagagaggtggggaatgaggaagctgagcaa
ttttccgaagaaaatgggatcttcttcaaagcaacatcagcgaaaacttctgtgaacgtt
aatgaccttttctatgatatagcaaaaagattggcaaaaggcagcctttcgaagcctagt
ggaacaaatctgcacggtgaagcacagagccaaagaatatcattttgttgctcaacatga

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